resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.
It will be discontinued on 31-May-2024.

Swiss-2DPAGE data (text records and image files) will continue to be available from

World-2DPAGE Repository no longer accepts submissions.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]


use 'Ctrl' to select several

Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0004]' for entry matching: NPM_RAT

World-2DPAGE Repository (0004):  NPM_RAT


General information about the entry
View entry in simple text format
Entry nameNPM_RAT
Primary accession numberP13084
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Nucleophosmin; Short=NPM; AltName: Full=Nucleolar phosphoprotein B23; AltName: Full=Nucleolar protein NO38; AltName: Full=Numatrin;.
Gene nameName=Npm1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
  map experimental info

pI=4.95; Mw=40000  [identification data]

MAPPING (identification):
SPOT 501: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP13084; NPM_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameNPM_RAT
Primary accession numberP13084
Secondary accession number(s) Q63698 Q64269
Sequence was last modified on January 1, 1990 (version 1)
Annotations were last modified on December 14, 2011 (version 99)
Name and origin of the protein
DescriptionRecName: Full=Nucleophosmin; Short=NPM; AltName: Full=Nucleolar phosphoprotein B23; AltName: Full=Nucleolar protein NO38; AltName: Full=Numatrin;
Gene nameName=Npm1
Encoded onName=Npm1
KeywordsAcetylation; ADP-ribosylation; Alternative splicing; Chaperone; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Disulfide bond; DNA-binding; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; RNA-binding; Ubl conjugation.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLJ03969; AAA40796.1; -; mRNA
EMBLM37039; AAA41730.1; -; Genomic_DNA
EMBLM37035; AAA41730.1; JOINED; Genomic_DNA
EMBLM37036; AAA41730.1; JOINED; Genomic_DNA
EMBLM37037; AAA41730.1; JOINED; Genomic_DNA
EMBLM37038; AAA41730.1; JOINED; Genomic_DNA
EMBLM37041; AAA41731.1; -; Genomic_DNA
EMBLM37035; AAA41731.1; JOINED; Genomic_DNA
EMBLM37036; AAA41731.1; JOINED; Genomic_DNA
EMBLM37037; AAA41731.1; JOINED; Genomic_DNA
EMBLM37038; AAA41731.1; JOINED; Genomic_DNA
EMBLM37040; AAA41731.1; JOINED; Genomic_DNA
EMBLM25062; AAA40795.1; -; Genomic_DNA
EMBLJ04943; AAA40794.1; -; mRNA
EMBLJ04944; AAA40793.1; -; Genomic_DNA
EMBLBC060579; AAH60579.1; -; mRNA
EMBLBC088088; AAH88088.1; -; mRNA
IPIIPI00197553; -; .
IPIIPI00230893; -; .
PIRA28939; A28939; .
PIRA36089; A36089; .
PIRB36089; A34168; .
RefSeqNP_037124.1; NM_012992.3; .
UniGeneRn.54537; -; .
ProteinModelPortalP13084; -; .
SMRP13084; 15-118; 241-292; .
STRINGP13084; -; .
PhosphoSiteP13084; -; .
World-2DPAGE0004:P13084; -; .
PRIDEP13084; -; .
EnsemblENSRNOT00000006591; ENSRNOP00000006591; ENSRNOG00000004616; .
EnsemblENSRNOT00000064744; ENSRNOP00000062356; ENSRNOG00000004616; .
GeneID25498; -; .
KEGGrno:25498; -; .
UCSCNM_012992; rat; .
CTD4869; -; .
RGD3192; Npm1; .
eggNOGroNOG11600; -; .
GeneTreeENSGT00440000034554; -; .
HOVERGENHBG001860; -; .
InParanoidP13084; -; .
OrthoDBEOG4W3SNZ; -; .
PhylomeDBP13084; -; .
NextBio606897; -; .
ArrayExpressP13084; -; .
GenevestigatorP13084; -; .
GermOnlineENSRNOG00000004616; Rattus norvegicus; .
GOGO:0005813; C:centrosome; ISS:UniProtKB; .
GOGO:0005730; C:nucleolus; IDA:RGD; .
GOGO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell; .
GOGO:0003677; F:DNA binding; IDA:RGD; .
GOGO:0019899; F:enzyme binding; IDA:RGD; .
GOGO:0051059; F:NF-kappaB binding; ISS:UniProtKB; .
GOGO:0005547; F:phosphatidylinositol-3; 4; 5-trisphosphate binding
GOGO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
GOGO:0051082; F:unfolded protein binding; ISS:UniProtKB; .
GOGO:0007569; P:cell aging; ISS:UniProtKB; .
GOGO:0007098; P:centrosome cycle; ISS:UniProtKB; .
GOGO:0006281; P:DNA repair; ISS:UniProtKB; .
GOGO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB; .
GOGO:0043085; P:positive regulation of catalytic activity; IDA:RGD; .
GOGO:0045740; P:positive regulation of DNA replication; IDA:RGD; .
GOGO:0051260; P:protein homooligomerization; IDA:RGD; .
GOGO:0045767; P:regulation of anti-apoptosis; IMP:RGD; .
GOGO:0032071; P:regulation of endodeoxyribonuclease activity; ISS:UniProtKB; .
GOGO:0060699; P:regulation of endoribonuclease activity; ISS:UniProtKB; .
InterProIPR004301; Nucleoplasmin; .
InterProIPR024057; Nucleoplasmin_core; .
Gene3DG3DSA:; G3DSA:; 1; .
KOK11276; -; .
PANTHERPTHR22747; Nucleoplasmin; 1; .
PfamPF03066; Nucleoplasmin; 1; .
SUPFAMSSF69203; Nucleoplasmin; 1; .

World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server