resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.
It will be discontinued on 31-May-2024.

World-2DPAGE Repository no longer accepts submissions.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]


use 'Ctrl' to select several

Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0030]' for entry matching: O35820

World-2DPAGE Repository (0030):  O35820


General information about the entry
View entry in simple text format
Entry nameRCL_RAT
Primary accession numberO35820
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Deoxyribonucleoside 5'-monophosphate N-glycosidase; EC=3.2.2.-; AltName: Full=c-Myc-responsive protein Rcl;.
Gene nameName=Rcl
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=4.85; Mw=23869  [identification data]

IDENTIFICATION: SPOT 2318: Mascot protein score=29. Number of peptides=1 [1].
MAPPING (identification):
SPOT 2318: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
UniProtKB/Swiss-ProtO35820; RCL_RAT.
World-2DPAGE RepositoryO35820; RCL_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameRCL_RAT
Primary accession numberO35820
Sequence was last modified on January 1, 1998 (version 1)
Annotations were last modified on September 21, 2011 (version 64)
Name and origin of the protein
DescriptionRecName: Full=Deoxyribonucleoside 5'-monophosphate N-glycosidase; EC=3.2.2.-; AltName: Full=c-Myc-responsive protein Rcl;
Gene nameName=Rcl
Encoded onName=Rcl
Keywords3D-structure; Complete proteome; Cytoplasm; Glycosidase; Hydrolase; Nucleotide metabolism; Nucleus; Phosphoprotein; Reference proteome.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLU82591; AAB95314.1; -; mRNA
IPIIPI00213058; -; .
RefSeqNP_598209.1; NM_133525.1; .
UniGeneRn.6997; -; .
PDB2KHZ; NMR; -; A/B=1-163
PDB2KLH; NMR; -; A/B=11-151
PDBsum2KHZ; -; .
PDBsum2KLH; -; .
ProteinModelPortalO35820; -; .
STRINGO35820; -; .
PRIDEO35820; -; .
EnsemblENSRNOT00000024815; ENSRNOP00000024815; ENSRNOG00000018397; .
GeneID171047; -; .
KEGGrno:171047; -; .
NMPDRfig|10116.3.peg.29653; -; .
UCSCNM_133525; rat; .
CTD171047; -; .
RGD620382; RGD620382; .
eggNOGmaNOG20190; -; .
GeneTreeENSGT00390000001216; -; .
HOVERGENHBG079123; -; .
InParanoidO35820; -; .
OrthoDBEOG4K9BDM; -; .
PhylomeDBO35820; -; .
NextBio621577; -; .
ArrayExpressO35820; -; .
GenevestigatorO35820; -; .
GermOnlineENSRNOG00000018397; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005634; C:nucleus; IDA:UniProtKB; .
GOGO:0070694; F:deoxyribonucleoside 5'-monophosphate N-glycosidase activity; IDA:UniProtKB; .
GOGO:0050144; F:nucleoside deoxyribosyltransferase activity; IEA:InterPro; .
GOGO:0042803; F:protein homodimerization activity; IDA:UniProtKB; .
GOGO:0009159; P:deoxyribonucleoside monophosphate catabolic process; IDA:UniProtKB; .
GOGO:0030307; P:positive regulation of cell growth; IDA:UniProtKB; .
InterProIPR007710; Nucleoside_deoxyribTrfase; .
PfamPF05014; Nuc_deoxyrib_tr; 1; .

World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server