World-2DPAGE Repository
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World-2DPAGE Repository
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Select Remote Interfaces
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SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
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Searching in 'World-2DPAGE Repository [0019]' for entry
matching:
O88960
World-2DPAGE Repository
(0019):
O88960
O88960
General information about the entry
View entry in simple text format
Entry name
O88960_RAT
Primary accession number
O88960
integrated into World-2DPAGE Repository (0019) on
December 9, 2009 (release 1)
2D Annotations were last modified on
May 30, 2011 (version 2)
General Annotations were last modified on
January 13, 2012 (version 2)
Name and origin of the protein
Description
SubName: Full=N-ethylmaleimide sensitive factor; Flags: Fragment;.
Gene name
Name=Nsf
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1111/j.1471-4159.2010.06719.x
;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
HIPP_SYNAP
{Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
map experimental info
HIPP_SYNAP
MAP LOCATIONS:
SPOT 263
:
pI=5.57; Mw=17224
[identification data]
IDENTIFICATION:
SPOT 263: Peptides number=49. SeqCov=68.1%. MOWSE score=5.83E+26 [
1
].
MAPPING (identification):
SPOT
263
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/TrEMBL
O88960; O88960_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/TrEMBL
Extracted from
UniProtKB/TrEMBL
, release:
2011_12
Entry name
O88960_RAT
Primary accession number
O88960
Sequence was last modified on
November 1, 1998 (version 1)
Annotations were last modified on
October 19, 2011 (version 51)
Name and origin of the protein
Description
SubName: Full=N-ethylmaleimide sensitive factor; Flags: Fragment;
Gene name
Name=Nsf
Encoded on
Name=Nsf
Keywords
Name=Nsf
.
Cross-references
EMBL
AF089839; AAC63035.1
; -; mRNA
IPI
IPI00210635; -
; .
UniGene
Rn.13345; -
; .
HSSP
P18708; 1QCS
; .
ProteinModelPortal
O88960; -
; .
IntAct
O88960; 1
; .
MINT
MINT-1775690; -
; .
STRING
O88960; -
; .
eggNOG
roNOG08218; -
; .
InParanoid
O88960; -
; .
ArrayExpress
O88960; -
; .
Genevestigator
O88960; -
; .
GO
GO:0005524; F:ATP binding
; IEA:InterPro; .
InterPro
IPR004201; Cell_div_Cdc48_dom2
; .
Pfam
PF02933; CDC48_2
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server