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Searching in 'World-2DPAGE Repository [0030]' for entry matching: OAT_RAT




World-2DPAGE Repository (0030):  OAT_RAT


OAT_RAT


General information about the entry
View entry in simple text format
Entry nameOAT_RAT
Primary accession numberP04182
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Ornithine aminotransferase, mitochondrial; EC=2.6.1.13; AltName: Full=Ornithine--oxo-acid aminotransferase; Flags: Precursor;.
Gene nameName=Oat
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info
 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=5.36; Mw=56826  [identification data]
pI=6.27; Mw=55198  [identification data]

IDENTIFICATION: SPOT 1176: Mascot protein score=327. Number of peptides=10 [1]
SPOT 1221: Mascot protein score=57. Number of peptides=2 [1].
MAPPING (identification):
SPOT 1176: Tandem mass spectrometry [1];
SPOT 1221: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtP04182; OAT_RAT.
World-2DPAGE RepositoryP04182; OAT_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameOAT_RAT
Primary accession numberP04182
Secondary accession number(s) Q6LDF6 Q6LDF7
Sequence was last modified on March 20, 1987 (version 1)
Annotations were last modified on November 16, 2011 (version 107)
Name and origin of the protein
DescriptionRecName: Full=Ornithine aminotransferase, mitochondrial; EC=2.6.1.13; AltName: Full=Ornithine--oxo-acid aminotransferase; Flags: Precursor;
Gene nameName=Oat
Encoded onName=Oat
KeywordsAminotransferase; Complete proteome; Direct protein sequencing; Mitochondrion; Pyridoxal phosphate; Reference proteome; Transferase; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM11842; AAA41766.1; -; mRNA
EMBLBC061551; AAH61551.1; -; mRNA
EMBLM93296; AAA42060.1; -; Genomic_DNA
EMBLM93295; AAA42060.1; JOINED; Genomic_DNA
EMBLM93301; AAA42061.1; -; Genomic_DNA
EMBLM93297; AAA42061.1; JOINED; Genomic_DNA
EMBLM93298; AAA42061.1; JOINED; Genomic_DNA
EMBLM93299; AAA42061.1; JOINED; Genomic_DNA
EMBLM93300; AAA42061.1; JOINED; Genomic_DNA
IPIIPI00193279; -; .
PIRA00600; XNRTO; .
RefSeqNP_071966.1; NM_022521.2; .
UniGeneRn.1430; -; .
ProteinModelPortalP04182; -; .
SMRP04182; 36-439; .
IntActP04182; 1; .
STRINGP04182; -; .
PhosphoSiteP04182; -; .
PRIDEP04182; -; .
EnsemblENSRNOT00000022628; ENSRNOP00000022628; ENSRNOG00000016807; .
GeneID64313; -; .
KEGGrno:64313; -; .
NMPDRfig|10116.3.peg.3136; -; .
UCSCNM_022521; rat; .
CTD4942; -; .
RGD621724; Oat; .
eggNOGroNOG11436; -; .
GeneTreeENSGT00530000062907; -; .
HOVERGENHBG000434; -; .
InParanoidP04182; -; .
OMAVWDPEGK; -; .
OrthoDBEOG4MSCZ6; -; .
PhylomeDBP04182; -; .
NextBio612984; -; .
ArrayExpressP04182; -; .
GenevestigatorP04182; -; .
GermOnlineENSRNOG00000016807; Rattus norvegicus; .
GOGO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell; .
GOGO:0003992; F:N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity; TAS:RGD; .
GOGO:0004587; F:ornithine-oxo-acid transaminase activity; IEA:EC; .
GOGO:0030170; F:pyridoxal phosphate binding; IEA:InterPro; .
GOGO:0006591; P:ornithine metabolic process; TAS:RGD; .
InterProIPR005814; Aminotrans_3; .
InterProIPR010164; Orn_aminotrans; .
InterProIPR015424; PyrdxlP-dep_Trfase_major_dom; .
InterProIPR015421; PyrdxlP-dep_Trfase_major_sub1; .
InterProIPR015422; PyrdxlP-dep_Trfase_major_sub2; .
Gene3DG3DSA:3.40.640.10; PyrdxlP-dep_Trfase_major_sub1; 1; .
Gene3DG3DSA:3.90.1150.10; PyrdxlP-dep_Trfase_major_sub2; 2; .
KOK00819; -; .
PANTHERPTHR11986; Aminotrans_3; 1; .
PANTHERPTHR11986:SF18; Orn_aminotrans; 1; .
PfamPF00202; Aminotran_3; 1; .
SUPFAMSSF53383; PyrdxlP-dep_Trfase_major; 1; .
TIGRFAMsTIGR01885; Orn_aminotrans; 1; .
PROSITEPS00600; AA_TRANSFER_CLASS_3; 1; .



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