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World-2DPAGE Repository

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Searching in 'World-2DPAGE Repository [0004]' for entry matching: OMP_RAT

World-2DPAGE Repository (0004):  OMP_RAT


General information about the entry
View entry in simple text format
Entry nameOMP_RAT
Primary accession numberP08523
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Olfactory marker protein; AltName: Full=Olfactory neuronal-specific protein;.
Gene nameName=Omp
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
  map experimental info

pI=5.12; Mw=18000  [identification data]

MAPPING (identification):
SPOT 754: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP08523; OMP_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameOMP_RAT
Primary accession numberP08523
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on September 21, 2011 (version 80)
Name and origin of the protein
DescriptionRecName: Full=Olfactory marker protein; AltName: Full=Olfactory neuronal-specific protein;
Gene nameName=Omp
Encoded onName=Omp
Keywords3D-structure; Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Olfaction; Reference proteome; Sensory transduction.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLM15644; AAA41757.1; -; mRNA
EMBLM26926; AAA03054.1; -; Unassigned_DNA
IPIIPI00231790; -; .
PIRA27450; A27450; .
RefSeqNP_036748.1; NM_012616.1; .
UniGeneRn.9720; -; .
PDB1JYT; NMR; -; A=1-163
PDB1ZRI; NMR; -; A=1-162
PDBsum1JYT; -; .
PDBsum1ZRI; -; .
ProteinModelPortalP08523; -; .
SMRP08523; 1-163; .
DisProtDP00279; -; .
World-2DPAGE0004:P08523; -; .
PRIDEP08523; -; .
GeneID24612; -; .
KEGGrno:24612; -; .
CTD4975; -; .
RGD3231; Omp; .
HOVERGENHBG007595; -; .
NextBio603848; -; .
GenevestigatorP08523; -; .
GOGO:0005829; C:cytosol; NAS:RGD; .
GOGO:0042277; F:peptide binding; IDA:RGD; .
GOGO:0005515; F:protein binding; IPI:RGD; .
GOGO:0004871; F:signal transducer activity; NAS:RGD; .
GOGO:0007608; P:sensory perception of smell; NAS:RGD; .
InterProIPR009103; Olfactory_marker; .
Gene3DG3DSA:; Olfactory_marker; 1; .
PANTHERPTHR15357; Olfactory_marker; 1; .
PfamPF06554; Olfactory_mark; 1; .
ProDomPD022055; Olfactory_marker; 1; .
SUPFAMSSF63697; Olfactory_marker; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server