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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0022]' for entry matching: P04639 World-2DPAGE Repository (0022):  P04639 P04639 General information about the entry View entry in simple text format Entry name APOA1_RAT Primary accession number P04639 integrated into World-2DPAGE Repository (0022) on  May 7, 2010 (release 1) 2D Annotations were last modified on June 22, 2011 (version 2) General Annotations were last modified on  November 24, 2011 (version 2) Name and origin of the protein Description RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Flags: Precursor;. Gene name Name=Apoa1 Annotated species Rattus [TaxID: 10114] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000593; Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L. ''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity'' Proteomics 11(16):3369-3379 (2011) 2D PAGE maps for identified proteins How to interpret a protein HCR_LCR_HEART {HCR LCR Cardiac Map} Rattus Tissue: Heart   map experimental info   HCR_LCR_HEART MAP LOCATIONS: SPOT 443: pI=5.52; Mw=30100   [identification data] IDENTIFICATION: SPOT 443: SeqCov=29.7%. Peptides MS=9/20. Mascot PMF Score=55 [1]. PEPTIDE EVIDENCE: SPOT 443: 162-VVAEEFR-168 (34): 131-WNEEVEAYR-139 (75): 64-QLNLNLLDNWDTLGSTVGR-82 (15) [1]. MAPPING (identification): SPOT 443: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Jatin Burniston, Liverpool John Moores University, UK Cross-references UniProtKB/Swiss-Prot P04639; APOA1_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name APOA1_RAT Primary accession number P04639 Secondary accession number(s) O08877 O09054 Q5EBB2 Sequence was last modified on  May 1, 2007 (version 2) Annotations were last modified on  November 16, 2011 (version 87) Name and origin of the protein Description RecName: Full=Apolipoprotein A-I; Short=Apo-AI; Short=ApoA-I; AltName: Full=Apolipoprotein A1; Flags: Precursor; Gene name Name=Apoa1 Encoded on Name=Apoa1 Keywords Cholesterol metabolism; Complete proteome; Direct protein sequencing; HDL; Lipid metabolism; Lipid transport; Phosphoprotein; Reference proteome; Repeat; Secreted; Signal; Steroid metabolism; Transport. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M00001; AAA40749.1; -; mRNA EMBL X00558; CAA25224.1; -; mRNA EMBL J02597; AAA40745.1; -; Genomic_DNA EMBL U79576; AAB58428.1; -; Genomic_DNA EMBL U79577; AAB58429.1; -; Genomic_DNA EMBL U79578; AAB58430.1; -; Genomic_DNA EMBL BC089820; AAH89820.1; -; mRNA IPI IPI00197703; -; . PIR A24700; A24700; . RefSeq NP_036870.1; NM_012738.1; . UniGene Rn.10308; -; . ProteinModelPortal P04639; -; . SMR P04639; 25-258; . DIP DIP-29911N; -; . IntAct P04639; 1; . PRIDE P04639; -; . GeneID 25081; -; . KEGG rno:25081; -; . CTD 335; -; . RGD 2130; Apoa1; . HOVERGEN HBG105708; -; . NextBio 605334; -; . Genevestigator P04639; -; . GO GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW; . GO GO:0005634; C:nucleus; IDA:RGD; . GO GO:0017127; F:cholesterol transporter activity; IDA:RGD; . GO GO:0055102; F:lipase inhibitor activity; IDA:RGD; . GO GO:0008289; F:lipid binding; IEA:InterPro; . GO GO:0005548; F:phospholipid transporter activity; IDA:RGD; . GO GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW; . GO GO:0042157; P:lipoprotein metabolic process; IEA:InterPro; . GO GO:0060192; P:negative regulation of lipase activity; IDA:RGD; . GO GO:0031100; P:organ regeneration; IDA:RGD; . GO GO:0014012; P:peripheral nervous system axon regeneration; IEP:RGD; . GO GO:0042493; P:response to drug; IEP:RGD; . GO GO:0043627; P:response to estrogen stimulus; IEP:RGD; . GO GO:0007584; P:response to nutrient; IEP:RGD; . InterPro IPR013326; ApoA/E_ApoLp; . InterPro IPR000074; ApoA1_A4_E; . Gene3D G3DSA:1.20.120.20; ApoA/E_ApoLp; 1; . KO K08757; -; . Pfam PF01442; Apolipoprotein; 1; . World-2DPAGE Repository (search AC)