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World-2DPAGE Repository
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Select Remote Interfaces
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SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
P07895
World-2DPAGE Repository
(0014):
P07895
P07895
General information about the entry
View entry in simple text format
Entry name
SODM_RAT
Primary accession number
P07895
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Flags: Precursor;.
Gene name
Name=Sod2
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3198
:
pI=8.62; Mw=24000
[identification data]
IDENTIFICATION:
SPOT 3198: SeqCov=30%. MascotPMF=60 [
1
].
MAPPING (identification):
SPOT
3198
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
P07895; SODM_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
SODM_RAT
Primary accession number
P07895
Sequence was last modified on
May 1, 1992 (version 2)
Annotations were last modified on
November 16, 2011 (version 110)
Name and origin of the protein
Description
RecName: Full=Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Flags: Precursor;
Gene name
Name=Sod2
Encoded on
Name=Sod2
Keywords
Acetylation
;
Complete proteome
;
Direct protein sequencing
;
Manganese
;
Metal-binding
;
Mitochondrion
;
Nitration
;
Oxidoreductase
;
Reference proteome
;
Transit peptide
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
Y00497; CAA68549.1
; -; mRNA
EMBL
X56600; CAA39937.1
; -; Genomic_DNA
EMBL
BC070913; AAH70913.1
; -; mRNA
IPI
IPI00211593; -
; .
PIR
S21661; DSRTN
; .
RefSeq
NP_058747.1; NM_017051.2
; .
UniGene
Rn.10488; -
; .
ProteinModelPortal
P07895; -
; .
SMR
P07895; 25-222
; .
IntAct
P07895; 1
; .
STRING
P07895; -
; .
PhosphoSite
P07895; -
; .
Rat-heart-2DPAGE
P07895; -
; .
World-2DPAGE
0004:P07895; -
; .
PRIDE
P07895; -
; .
Ensembl
ENSRNOT00000025794; ENSRNOP00000025794
; ENSRNOG00000019048; .
GeneID
24787; -
; .
KEGG
rno:24787; -
; .
UCSC
NM_017051; rat
; .
CTD
6648; -
; .
RGD
3732; Sod2
; .
eggNOG
roNOG14008; -
; .
GeneTree
ENSGT00390000011877; -
; .
HOVERGEN
HBG004451; -
; .
InParanoid
P07895; -
; .
OMA
DYVNAIW; -
; .
OrthoDB
EOG4R503R; -
; .
PhylomeDB
P07895; -
; .
NextBio
604412; -
; .
ArrayExpress
P07895; -
; .
Genevestigator
P07895; -
; .
GermOnline
ENSRNOG00000019048; Rattus norvegicus
; .
GO
GO:0042645; C:mitochondrial nucleoid
; IDA:RGD; .
GO
GO:0005625; C:soluble fraction
; IDA:RGD; .
GO
GO:0003677; F:DNA binding
; IDA:RGD; .
GO
GO:0042802; F:identical protein binding
; IDA:RGD; .
GO
GO:0030145; F:manganese ion binding
; ISS:UniProtKB; .
GO
GO:0019825; F:oxygen binding
; IDA:RGD; .
GO
GO:0004784; F:superoxide dismutase activity
; ISS:UniProtKB; .
GO
GO:0001315; P:age-dependent response to reactive oxygen species
; ISS:UniProtKB; .
GO
GO:0006916; P:anti-apoptosis
; IMP:RGD; .
GO
GO:0071361; P:cellular response to ethanol
; IEP:RGD; .
GO
GO:0050665; P:hydrogen peroxide biosynthetic process
; IDA:RGD; .
GO
GO:0006357; P:regulation of transcription from RNA polymerase II promoter
; ISS:UniProtKB; .
GO
GO:0019430; P:removal of superoxide radicals
; IDA:RGD; .
GO
GO:0046686; P:response to cadmium ion
; IEP:RGD; .
GO
GO:0042493; P:response to drug
; IDA:RGD; .
GO
GO:0051602; P:response to electrical stimulus
; IEP:RGD; .
GO
GO:0042542; P:response to hydrogen peroxide
; IEP:RGD; .
GO
GO:0001666; P:response to hypoxia
; IEP:RGD; .
GO
GO:0033591; P:response to L-ascorbic acid
; IEP:RGD; .
GO
GO:0032496; P:response to lipopolysaccharide
; IEP:RGD; .
GO
GO:0010042; P:response to manganese ion
; IEP:RGD; .
GO
GO:0010269; P:response to selenium ion
; IEP:RGD; .
GO
GO:0034021; P:response to silicon dioxide
; IEP:RGD; .
GO
GO:0010043; P:response to zinc ion
; IEP:RGD; .
InterPro
IPR001189; Mn/Fe_SOD
; .
InterPro
IPR019833; Mn/Fe_SOD_BS
; .
InterPro
IPR019832; Mn/Fe_SOD_C
; .
InterPro
IPR019831; Mn/Fe_SOD_N
; .
KO
K04564; -
; .
PANTHER
PTHR11404; SODismutase
; 1; .
Pfam
PF02777; Sod_Fe_C
; 1; .
Pfam
PF00081; Sod_Fe_N
; 1; .
PIRSF
PIRSF000349; SODismutase
; 1; .
PRINTS
PR01703; MNSODISMTASE
; .
SUPFAM
SSF46609; SODismutase
; 1; .
SUPFAM
SSF54719; SODismutase
; 1; .
PROSITE
PS00088; SOD_MN
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server