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Searching in 'World-2DPAGE Repository [0014]' for entry matching: P07936




World-2DPAGE Repository (0014):  P07936


P07936


General information about the entry
View entry in simple text format
Entry nameNEUM_RAT
Primary accession numberP07936
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Neuromodulin; AltName: Full=Axonal membrane protein GAP-43; AltName: Full=Growth-associated protein 43; AltName: Full=Protein F1;.
Gene nameName=Gap43
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900680;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
RAT_CEREBELLUM_21D
  map experimental info
 
RAT_CEREBELLUM_21D

MAP LOCATIONS:
pI=4.50; Mw=42000  [identification data]

IDENTIFICATION: SPOT 2962: SeqCov=34%. MascotPMF=64 [1].
MAPPING (identification):
SPOT 2962: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE10017.
UniProtKB/Swiss-ProtP07936; NEUM_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameNEUM_RAT
Primary accession numberP07936
Secondary accession number(s) A0JPM4
Sequence was last modified on August 1, 1988 (version 1)
Annotations were last modified on October 19, 2011 (version 103)
Name and origin of the protein
DescriptionRecName: Full=Neuromodulin; AltName: Full=Axonal membrane protein GAP-43; AltName: Full=Growth-associated protein 43; AltName: Full=Protein F1;
Gene nameName=Gap43
Encoded onName=Gap43
KeywordsCalmodulin-binding; Cell junction; Cell membrane; Cell projection; Complete proteome; Developmental protein; Differentiation; Direct protein sequencing; Growth regulation; Lipoprotein; Membrane; Neurogenesis; Palmitate; Phosphoprotein; Reference proteome; Synapse.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM16228; AAA41190.1; -; mRNA
EMBLM16736; AAA41192.1; -; mRNA
EMBLX06338; CAA29644.1; -; mRNA
EMBLL21192; AAA41189.1; -; Genomic_DNA
EMBLL21190; AAA41189.1; JOINED; Genomic_DNA
EMBLL21191; AAA41189.1; JOINED; Genomic_DNA
EMBLBC127502; AAI27503.1; -; mRNA
IPIIPI00212320; -; .
PIRA26964; A26964; .
RefSeqNP_058891.1; NM_017195.3; .
UniGeneRn.10928; -; .
STRINGP07936; -; .
PhosphoSiteP07936; -; .
EnsemblENSRNOT00000002091; ENSRNOP00000002091; ENSRNOG00000001528; .
GeneID29423; -; .
KEGGrno:29423; -; .
UCSCNM_017195; rat; .
CTD2596; -; .
RGD62071; Gap43; .
eggNOGroNOG16581; -; .
GeneTreeENSGT00530000063966; -; .
HOVERGENHBG006468; -; .
InParanoidP07936; -; .
PhylomeDBP07936; -; .
NextBio609118; -; .
ArrayExpressP07936; -; .
GenevestigatorP07936; -; .
GermOnlineENSRNOG00000001528; Rattus norvegicus; .
GOGO:0030054; C:cell junction; IEA:UniProtKB-KW; .
GOGO:0031527; C:filopodium membrane; IEA:UniProtKB-SubCell; .
GOGO:0032584; C:growth cone membrane; IEA:UniProtKB-SubCell; .
GOGO:0045202; C:synapse; IEA:UniProtKB-SubCell; .
GOGO:0005516; F:calmodulin binding; IEA:UniProtKB-KW; .
GOGO:0040008; P:regulation of growth; IEA:UniProtKB-KW; .
GOGO:0042246; P:tissue regeneration; IEP:RGD; .
InterProIPR000048; IQ_motif_EF-hand-BS; .
InterProIPR001422; Neuromodulin; .
InterProIPR017454; Neuromodulin_C; .
InterProIPR018947; Neuromodulin_gap-junction_N; .
InterProIPR018243; Neuromodulin_palmitoyl/P_site; .
PfamPF00612; IQ; 1; .
PfamPF06614; Neuromodulin; 1; .
PfamPF10580; Neuromodulin_N; 1; .
PRINTSPR00215; NEUROMODULIN; .
SMARTSM00015; IQ; 1; .
PROSITEPS50096; IQ; 1; .
PROSITEPS00412; NEUROMODULIN_1; 1; .
PROSITEPS00413; NEUROMODULIN_2; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server