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Searching in 'World-2DPAGE Repository [0019]' for entry matching: P08082

World-2DPAGE Repository (0019):  P08082


General information about the entry
View entry in simple text format
Entry nameCLCB_RAT
Primary accession numberP08082
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Clathrin light chain B; Short=Lcb;.
Gene nameName=Cltb
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
  map experimental info

pI=4.56; Mw=25216  [identification data]

IDENTIFICATION: SPOT 1104: Peptides number=7. SeqCov=27.5%. MOWSE score=4.44E+6 [1].
MAPPING (identification):
SPOT 1104: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Willard Freeman, Penn State College of Medicine, USA
UniProtKB/Swiss-ProtP08082; CLCB_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameCLCB_RAT
Primary accession numberP08082
Sequence was last modified on August 1, 1988 (version 1)
Annotations were last modified on November 16, 2011 (version 90)
Name and origin of the protein
DescriptionRecName: Full=Clathrin light chain B; Short=Lcb;
Gene nameName=Cltb
Encoded onName=Cltb
KeywordsAlternative splicing; Calcium; Coated pit; Complete proteome; Cytoplasmic vesicle; Direct protein sequencing; Disulfide bond; Membrane; Phosphoprotein; Reference proteome.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLM15883; AAA40890.1; -; mRNA
EMBLM19262; AAA40891.1; -; mRNA
IPIIPI00207308; -; .
IPIIPI00230927; -; .
PIRB25994; LRRTB2; .
RefSeqNP_446287.1; NM_053835.1; .
UniGeneRn.3440; -; .
STRINGP08082; -; .
PhosphoSiteP08082; -; .
PRIDEP08082; -; .
EnsemblENSRNOT00000023651; ENSRNOP00000023651; ENSRNOG00000017506; .
EnsemblENSRNOT00000032402; ENSRNOP00000028993; ENSRNOG00000017506; .
GeneID116561; -; .
KEGGrno:116561; -; .
UCSCM19262; rat; .
UCSCNM_053835; rat; .
CTD1212; -; .
RGD621353; Cltb; .
eggNOGmaNOG12105; -; .
GeneTreeENSGT00390000010441; -; .
HOVERGENHBG003386; -; .
InParanoidP08082; -; .
OrthoDBEOG4TF0M2; -; .
PhylomeDBP08082; -; .
NextBio619229; -; .
ArrayExpressP08082; -; .
GenevestigatorP08082; -; .
GermOnlineENSRNOG00000017506; Rattus norvegicus; .
GOGO:0030132; C:clathrin coat of coated pit; NAS:UniProtKB; .
GOGO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro; .
GOGO:0005326; F:neurotransmitter transporter activity; NAS:UniProtKB; .
GOGO:0042277; F:peptide binding; IDA:RGD; .
GOGO:0005198; F:structural molecule activity; IEA:InterPro; .
GOGO:0006886; P:intracellular protein transport; IEA:InterPro; .
GOGO:0007269; P:neurotransmitter secretion; NAS:UniProtKB; .
GOGO:0016183; P:synaptic vesicle coating; NAS:UniProtKB; .
InterProIPR000996; Clathrin_L-chain; .
KOK04645; -; .
PANTHERPTHR10639; Clathrin_lg_ch; 1; .
PfamPF01086; Clathrin_lg_ch; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server