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Searching in 'World-2DPAGE Repository [0022]' for entry matching: P09495




World-2DPAGE Repository (0022):  P09495

P09495


General information about the entry
View entry in simple text format
Entry nameTPM4_RAT
Primary accession numberP09495
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Tropomyosin alpha-4 chain; AltName: Full=Tropomyosin-4; Short=TM-4;.
Gene nameName=Tpm4
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=4.66; Mw=28549  [identification data]

IDENTIFICATION: SPOT 656: SeqCov=25.4%. Peptides MS=11/20. Mascot PMF Score=99 [1].
PEPTIDE EVIDENCE: SPOT 656: 203-AEFAER-208 (3) / 125-KYEEVAR-131 (27) / 13-KIQALQQQADDAEDR-27 (40) [1].
MAPPING (identification):
SPOT 656: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP09495; TPM4_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameTPM4_RAT
Primary accession numberP09495
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on November 16, 2011 (version 85)
Name and origin of the protein
DescriptionRecName: Full=Tropomyosin alpha-4 chain; AltName: Full=Tropomyosin-4; Short=TM-4;
Gene nameName=Tpm4
Encoded onName=Tpm4
KeywordsAcetylation; Actin-binding; Calcium; Coiled coil; Complete proteome; Cytoplasm; Cytoskeleton; Metal-binding; Muscle protein; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLJ02780; AAA42291.1; -; mRNA
EMBLY00169; CAA68360.1; -; Genomic_DNA
IPIIPI00214905; -; .
PIRS10623; S10623; .
RefSeqNP_036810.1; NM_012678.1; .
UniGeneRn.108199; -; .
ProteinModelPortalP09495; -; .
SMRP09495; 5-248; .
STRINGP09495; -; .
PRIDEP09495; -; .
EnsemblENSRNOT00000021073; ENSRNOP00000021073; ENSRNOG00000015496; .
GeneID24852; -; .
KEGGrno:24852; -; .
UCSCNM_012678; rat; .
CTD7171; -; .
RGD3899; Tpm4; .
eggNOGKOG1003; -; .
GeneTreeENSGT00550000074494; -; .
HOVERGENHBG107404; -; .
InParanoidP09495; -; .
OMAEKCKQVE; -; .
OrthoDBEOG4TXBSM; -; .
PhylomeDBP09495; -; .
NextBio604640; -; .
ArrayExpressP09495; -; .
GenevestigatorP09495; -; .
GermOnlineENSRNOG00000015496; Rattus norvegicus; .
GOGO:0003779; F:actin binding; IEA:UniProtKB-KW; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0006936; P:muscle contraction; TAS:RGD; .
InterProIPR000533; Tropomyosin; .
KOK10375; -; .
PfamPF00261; Tropomyosin; 1; .
PRINTSPR00194; TROPOMYOSIN; .
PROSITEPS00326; TROPOMYOSIN; 1; .


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