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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
P09495
World-2DPAGE Repository
(0022):
P09495
P09495
General information about the entry
View entry in simple text format
Entry name
TPM4_RAT
Primary accession number
P09495
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Tropomyosin alpha-4 chain; AltName: Full=Tropomyosin-4; Short=TM-4;.
Gene name
Name=Tpm4
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 656
:
pI=4.66; Mw=28549
[identification data]
IDENTIFICATION:
SPOT 656: SeqCov=25.4%. Peptides MS=11/20. Mascot PMF Score=99 [
1
].
PEPTIDE EVIDENCE:
SPOT 656: 203-AEFAER-208 (3) / 125-KYEEVAR-131 (27) / 13-KIQALQQQADDAEDR-27 (40) [
1
].
MAPPING (identification):
SPOT
656
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
P09495; TPM4_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
TPM4_RAT
Primary accession number
P09495
Sequence was last modified on
January 23, 2007 (version 3)
Annotations were last modified on
November 16, 2011 (version 85)
Name and origin of the protein
Description
RecName: Full=Tropomyosin alpha-4 chain; AltName: Full=Tropomyosin-4; Short=TM-4;
Gene name
Name=Tpm4
Encoded on
Name=Tpm4
Keywords
Acetylation
;
Actin-binding
;
Calcium
;
Coiled coil
;
Complete proteome
;
Cytoplasm
;
Cytoskeleton
;
Metal-binding
;
Muscle protein
;
Phosphoprotein
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
J02780; AAA42291.1
; -; mRNA
EMBL
Y00169; CAA68360.1
; -; Genomic_DNA
IPI
IPI00214905; -
; .
PIR
S10623; S10623
; .
RefSeq
NP_036810.1; NM_012678.1
; .
UniGene
Rn.108199; -
; .
ProteinModelPortal
P09495; -
; .
SMR
P09495; 5-248
; .
STRING
P09495; -
; .
PRIDE
P09495; -
; .
Ensembl
ENSRNOT00000021073; ENSRNOP00000021073
; ENSRNOG00000015496; .
GeneID
24852; -
; .
KEGG
rno:24852; -
; .
UCSC
NM_012678; rat
; .
CTD
7171; -
; .
RGD
3899; Tpm4
; .
eggNOG
KOG1003; -
; .
GeneTree
ENSGT00550000074494; -
; .
HOVERGEN
HBG107404; -
; .
InParanoid
P09495; -
; .
OMA
EKCKQVE; -
; .
OrthoDB
EOG4TXBSM; -
; .
PhylomeDB
P09495; -
; .
NextBio
604640; -
; .
ArrayExpress
P09495; -
; .
Genevestigator
P09495; -
; .
GermOnline
ENSRNOG00000015496; Rattus norvegicus
; .
GO
GO:0003779; F:actin binding
; IEA:UniProtKB-KW; .
GO
GO:0046872; F:metal ion binding
; IEA:UniProtKB-KW; .
GO
GO:0006936; P:muscle contraction
; TAS:RGD; .
InterPro
IPR000533; Tropomyosin
; .
KO
K10375; -
; .
Pfam
PF00261; Tropomyosin
; 1; .
PRINTS
PR00194; TROPOMYOSIN
; .
PROSITE
PS00326; TROPOMYOSIN
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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Make2D-DB II
package (
ver. 3.10.2
) from the
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