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Searching in 'World-2DPAGE Repository [0030]' for entry matching: P10719

World-2DPAGE Repository (0030):  P10719


General information about the entry
View entry in simple text format
Entry nameATPB_RAT
Primary accession numberP10719
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit beta, mitochondrial; EC=; Flags: Precursor;.
Gene nameName=Atp5b
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=4.68; Mw=65166  [identification data]
pI=4.88; Mw=63916  [identification data]
pI=4.59; Mw=62864  [identification data]
pI=4.87; Mw=61915  [identification data]
pI=4.82; Mw=61915  [identification data]
pI=4.95; Mw=61573  [identification data]
pI=4.87; Mw=60559  [identification data]
pI=4.77; Mw=58907  [identification data]

IDENTIFICATION: SPOT 914: Mascot protein score=378. Number of peptides=7 [1]
SPOT 964: Mascot protein score=149. Number of peptides=8 [1]; SPOT 995: Mascot protein score=258. Number of peptides=7 [1]; SPOT 1027: Mascot protein score=47. Number of peptides=1 [1]; SPOT 1030: Mascot protein score=98. Number of peptides=2 [1]; SPOT 1037: Mascot protein score=353. Number of peptides=8 [1]; SPOT 1069: Mascot protein score=392. Number of peptides=10 [1]; SPOT 1119: Mascot protein score=98. Number of peptides=3 [1].
MAPPING (identification):
SPOT 914: Tandem mass spectrometry [1];
SPOT 964: Tandem mass spectrometry [1];
SPOT 995: Tandem mass spectrometry [1];
SPOT 1027: Tandem mass spectrometry [1];
SPOT 1030: Tandem mass spectrometry [1];
SPOT 1037: Tandem mass spectrometry [1];
SPOT 1069: Tandem mass spectrometry [1];
SPOT 1119: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
UniProtKB/Swiss-ProtP10719; ATPB_RAT.
World-2DPAGE RepositoryP10719; ATPB_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameATPB_RAT
Primary accession numberP10719
Secondary accession number(s) Q499W0
Sequence was last modified on April 1, 1990 (version 2)
Annotations were last modified on November 16, 2011 (version 124)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit beta, mitochondrial; EC=; Flags: Precursor;
Gene nameName=Atp5b
Encoded onName=Atp5b
Keywords3D-structure; Acetylation; ATP synthesis; ATP-binding; CF(1); Complete proteome; Direct protein sequencing; Hydrogen ion transport; Hydrolase; Ion transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Nucleotide-binding; Phosphoprotein; Reference proteome; Transit peptide; Transport.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLBC099743; AAH99743.1; -; mRNA
EMBLM25301; AAA57154.1; -; mRNA
EMBLM19044; AAB02288.1; ALT_SEQ; mRNA
EMBLM57634; AAA40778.1; -; mRNA
IPIIPI00551812; -; .
PIRA28701; A28701; .
PIRA30160; A30160; .
RefSeqNP_599191.1; NM_134364.1; .
UniGeneRn.92965; -; .
PDB1MAB; X-ray; 2.80 A; B=51-529
PDB2F43; X-ray; 3.00 A; B=51-529
PDBsum1MAB; -; .
PDBsum2F43; -; .
ProteinModelPortalP10719; -; .
SMRP10719; 51-527; .
IntActP10719; 3; .
MINTMINT-4587159; -; .
STRINGP10719; -; .
PhosphoSiteP10719; -; .
UCD-2DPAGEP10719; -; .
World-2DPAGE0004:P10719; -; .
PRIDEP10719; -; .
GeneID171374; -; .
KEGGrno:171374; -; .
UCSCNM_134364; rat; .
CTD506; -; .
RGD621368; Atp5b; .
eggNOGroNOG07745; -; .
HOVERGENHBG004307; -; .
InParanoidP10719; -; .
OrthoDBEOG4ZCT4C; -; .
PhylomeDBP10719; -; .
NextBio622183; -; .
ArrayExpressP10719; -; .
GenevestigatorP10719; -; .
GermOnlineENSRNOG00000002840; Rattus norvegicus; .
GOGO:0000275; C:mitochondrial proton-transporting ATP synthase complex; catalytic core F(1); IDA:RGD
GOGO:0005524; F:ATP binding; IDA:RGD; .
GOGO:0005509; F:calcium ion binding; IDA:RGD; .
GOGO:0046933; F:hydrogen ion transporting ATP synthase activity; rotational mechanism; IEA:InterPro
GOGO:0008553; F:hydrogen-exporting ATPase activity; phosphorylative mechanism; IEA:InterPro
GOGO:0030228; F:lipoprotein particle receptor activity; IDA:RGD; .
GOGO:0006172; P:ADP biosynthetic process; IDA:RGD; .
GOGO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro; .
GOGO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro; .
InterProIPR020003; ATPase_a/bsu_AS; .
InterProIPR003593; ATPase_AAA+_core; .
InterProIPR005722; ATPase_F1-cplx_bsu; .
InterProIPR018118; ATPase_F1/A1-cplx_a/bsu_N; .
InterProIPR000793; ATPase_F1/V1/A1-cplx_a/bsu_C; .
InterProIPR004100; ATPase_F1/V1/A1-cplx_a/bsu_N; .
InterProIPR000194; ATPase_F1/V1/A1_a/bsu_nucl-bd; .
InterProIPR024034; ATPase_F1_bsu/V1_C; .
Gene3DG3DSA:1.10.1140.10; G3DSA:1.10.1140.10; 1; .
KOK02133; -; .
PANTHERPTHR15184:SF8; ATPase_F1_b; 1; .
PfamPF00006; ATP-synt_ab; 1; .
PfamPF00306; ATP-synt_ab_C; 1; .
PfamPF02874; ATP-synt_ab_N; 1; .
SMARTSM00382; AAA; 1; .
SUPFAMSSF47917; ATPase_a/b_C; 1; .
SUPFAMSSF50615; ATPase_a/b_N; 1; .
TIGRFAMsTIGR01039; AtpD; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server