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Searching in 'World-2DPAGE Repository [0022]' for entry matching: P12007

World-2DPAGE Repository (0022):  P12007


General information about the entry
View entry in simple text format
Entry nameIVD_RAT
Primary accession numberP12007
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial; Short=IVD; EC=; Flags: Precursor;.
Gene nameName=Ivd
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

Tissue: Heart
  map experimental info

pI=8.03; Mw=46862  [identification data]
pI=8.03; Mw=46862  [identification data]
pI=8.03; Mw=46862  [identification data]

IDENTIFICATION: SPOT 168: SeqCov=32.8%. Peptides MS=13/20. Mascot PMF Score=125 [1]
SPOT 315: SeqCov=17.9%. Peptides MS=7/20. Mascot PMF Score=52 [1]; SPOT 567: SeqCov=26.9%. Peptides MS=8/20. Mascot PMF Score=68 [1].
PEPTIDE EVIDENCE: SPOT 567: 418-AFNADFR-424 (52) / 339-QYVYNVAR-346 (30) / 119-ASAAVGLSYGAHSNLCINQIVR-140 (66) [1].
MAPPING (identification):
SPOT 168: Peptide mass fingerprinting [1];
SPOT 315: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 567: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
UniProtKB/Swiss-ProtP12007; IVD_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameIVD_RAT
Primary accession numberP12007
Sequence was last modified on April 1, 1990 (version 2)
Annotations were last modified on November 16, 2011 (version 111)
Name and origin of the protein
DescriptionRecName: Full=Isovaleryl-CoA dehydrogenase, mitochondrial; Short=IVD; EC=; Flags: Precursor;
Gene nameName=Ivd
Encoded onName=Ivd
KeywordsAcetylation; Complete proteome; Direct protein sequencing; FAD; Flavoprotein; Mitochondrion; Oxidoreductase; Reference proteome; Transit peptide.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLJ05031; AAA41454.1; -; mRNA
EMBLBC088401; AAH88401.1; -; mRNA
EMBLM19867; AAA41459.1; -; mRNA
IPIIPI00193716; -; .
PIRC34252; C34252; .
RefSeqNP_036724.1; NM_012592.2; .
UniGeneRn.147; -; .
ProteinModelPortalP12007; -; .
SMRP12007; 36-422; .
STRINGP12007; -; .
PRIDEP12007; -; .
EnsemblENSRNOT00000013829; ENSRNOP00000013829; ENSRNOG00000009421; .
GeneID24513; -; .
KEGGrno:24513; -; .
NMPDRfig|10116.3.peg.19461; -; .
UCSCNM_012592; rat; .
CTD3712; -; .
RGD2936; Ivd; .
eggNOGroNOG10079; -; .
GeneTreeENSGT00590000082906; -; .
HOVERGENHBG000224; -; .
InParanoidP12007; -; .
OrthoDBEOG4RR6HF; -; .
PhylomeDBP12007; -; .
NextBio603537; -; .
ArrayExpressP12007; -; .
GenevestigatorP12007; -; .
GermOnlineENSRNOG00000009421; Rattus norvegicus; .
GOGO:0005759; C:mitochondrial matrix; IDA:BHF-UCL; .
GOGO:0031966; C:mitochondrial membrane; IDA:BHF-UCL; .
GOGO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro; .
GOGO:0008470; F:isovaleryl-CoA dehydrogenase activity; IDA:BHF-UCL; .
GOGO:0033539; P:fatty acid beta-oxidation using acyl-CoA dehydrogenase; IC:BHF-UCL; .
GOGO:0006552; P:leucine catabolic process; IDA:BHF-UCL; .
GOGO:0051260; P:protein homooligomerization; TAS:RGD; .
InterProIPR006089; Acyl-CoA_DH_CS; .
InterProIPR006092; Acyl-CoA_DH_N; .
InterProIPR006090; Acyl-CoA_Oxase/DH_1; .
InterProIPR006091; Acyl-CoA_Oxase/DH_cen-dom; .
InterProIPR009075; AcylCo_DH/oxidase_C; .
InterProIPR013786; AcylCoA_DH/ox_N; .
InterProIPR009100; AcylCoA_DH/oxidase; .
Gene3DG3DSA:; Acyl_CoA_DH/ox_M; 1; .
Gene3DG3DSA:1.10.540.10; AcylCoA_DH/ox_N; 1; .
Gene3DG3DSA:; AcylCoA_DH_1/2_C; 1; .
KOK00253; -; .
PfamPF00441; Acyl-CoA_dh_1; 1; .
PfamPF02770; Acyl-CoA_dh_M; 1; .
PfamPF02771; Acyl-CoA_dh_N; 1; .
SUPFAMSSF56645; AcylCoA_dehyd_NM; 1; .
SUPFAMSSF47203; AcylCoADH_C_like; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server