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Searching in 'World-2DPAGE Repository [0019]' for entry matching: P16446




World-2DPAGE Repository (0019):  P16446

P16446


General information about the entry
View entry in simple text format
Entry namePIPNA_RAT
Primary accession numberP16446
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Phosphatidylinositol transfer protein alpha isoform; Short=PI-TP-alpha; Short=PtdIns transfer protein alpha; Short=PtdInsTP alpha;.
Gene nameName=Pitpna
Synonyms=Pitpn
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info 		 
HIPP_SYNAP

MAP LOCATIONS:
pI=5.97; Mw=32115  [identification data]

IDENTIFICATION: SPOT 657: Peptides number=7. SeqCov=24.7%. MOWSE score=1.09E+7 [1].
MAPPING (identification):
SPOT 657: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/Swiss-ProtP16446; PIPNA_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry namePIPNA_RAT
Primary accession numberP16446
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 97)
Name and origin of the protein
DescriptionRecName: Full=Phosphatidylinositol transfer protein alpha isoform; Short=PI-TP-alpha; Short=PtdIns transfer protein alpha; Short=PtdInsTP alpha;
Gene nameName=Pitpna
Synonyms=Pitpn
Encoded onName=Pitpna; Synonyms=Pitpn
Keywords3D-structure; Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Lipid-binding; Phosphoprotein; Reference proteome; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM25758; AAA41984.1; -; mRNA
EMBLBC070945; AAH70945.1; -; mRNA
IPIIPI00231749; -; .
PIRA34391; A34391; .
RefSeqNP_058927.1; NM_017231.1; .
UniGeneRn.9771; -; .
PDB1T27; X-ray; 2.20 A; A=1-271
PDBsum1T27; -; .
ProteinModelPortalP16446; -; .
SMRP16446; 2-270; .
STRINGP16446; -; .
PhosphoSiteP16446; -; .
World-2DPAGE0004:P16446; -; .
PRIDEP16446; -; .
EnsemblENSRNOT00000005368; ENSRNOP00000005368; ENSRNOG00000003846; .
GeneID29525; -; .
KEGGrno:29525; -; .
UCSCNM_017231; rat; .
CTD5306; -; .
RGD61885; Pitpna; .
eggNOGmaNOG05283; -; .
GeneTreeENSGT00550000074351; -; .
HOVERGENHBG058915; -; .
InParanoidP16446; -; .
OrthoDBEOG42JNS2; -; .
NextBio609484; -; .
ArrayExpressP16446; -; .
GenevestigatorP16446; -; .
GermOnlineENSRNOG00000003846; Rattus norvegicus; .
GOGO:0008526; F:phosphatidylinositol transporter activity; TAS:RGD; .
GOGO:0005543; F:phospholipid binding; IDA:MGI; .
InterProIPR001666; PI_transfer; .
InterProIPR023393; START-like_dom; .
Gene3DG3DSA:3.30.530.20; G3DSA:3.30.530.20; 1; .
PANTHERPTHR10658; PI_transfer; 1; .
PfamPF02121; IP_trans; 1; .
PRINTSPR00391; PITRANSFER; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server