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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: P18395 World-2DPAGE Repository (0030):  P18395 P18395 General information about the entry View entry in simple text format Entry name CSDE1_RAT Primary accession number P18395 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description RecName: Full=Cold shock domain-containing protein E1; AltName: Full=Protein UNR;. Gene name Name=Csde1 Synonyms=Unr Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 278: pI=6.26; Mw=93633   [identification data] SPOT 316: pI=6.11; Mw=91584   [identification data] SPOT 330: pI=6.26; Mw=91078   [identification data] IDENTIFICATION: SPOT 278: Mascot protein score=84. Number of peptides=4 [1] SPOT 316: Mascot protein score=172. Number of peptides=6 [1]; SPOT 330: Mascot protein score=238. Number of peptides=6 [1]. MAPPING (identification): SPOT 278: Tandem mass spectrometry [1]; SPOT 316: Tandem mass spectrometry [1]; SPOT 330: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/Swiss-Prot P18395; CSDE1_RAT. World-2DPAGE Repository P18395; CSDE1_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name CSDE1_RAT Primary accession number P18395 Sequence was last modified on  November 1, 1990 (version 1) Annotations were last modified on  October 19, 2011 (version 95) Name and origin of the protein Description RecName: Full=Cold shock domain-containing protein E1; AltName: Full=Protein UNR; Gene name Name=Csde1 Synonyms=Unr Encoded on Name=Csde1; Synonyms=Unr Keywords Acetylation; Complete proteome; Cytoplasm; Phosphoprotein; Reference proteome; Repeat; RNA-binding. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X52311; CAA36549.1; -; mRNA IPI IPI00190971; -; . PIR S11210; S11210; . RefSeq NP_446458.1; NM_054006.1; . UniGene Rn.3562; -; . ProteinModelPortal P18395; -; . SMR P18395; 16-90; 172-259; 345-424 508-582 673-744; . STRING P18395; -; . PhosphoSite P18395; -; . PRIDE P18395; -; . GeneID 117180; -; . KEGG rno:117180; -; . UCSC NM_054006; rat; . CTD 7812; -; . RGD 619726; Csde1; . eggNOG roNOG14308; -; . GeneTree ENSGT00390000016950; -; . HOVERGEN HBG013042; -; . NextBio 620034; -; . Genevestigator P18395; -; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0003677; F:DNA binding; IEA:InterPro; . GO GO:0003723; F:RNA binding; IEA:UniProtKB-KW; . GO GO:0006355; P:regulation of transcription; DNA-dependent; IEA:InterPro InterPro IPR019844; Cold-shock_CS; . InterPro IPR011129; Cold_shock_prot; . InterPro IPR002059; CSP_DNA-bd; . InterPro IPR012340; NA-bd_OB-fold; . InterPro IPR016027; NA-bd_OB-fold-like; . InterPro IPR024642; SUZ-C; . Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 5; . Pfam PF00313; CSD; 5; . Pfam PF12901; SUZ-C; 1; . SMART SM00357; CSP; 5; . SUPFAM SSF50249; Nucleic_acid_OB; 5; . PROSITE PS00352; COLD_SHOCK; 4; . World-2DPAGE Repository (search AC)