World-2DPAGE Repository
Home
|
Contact
!!This displayer contains script commands. You should enable JavaScripting within your browser preferences, or use another browser!
World-2DPAGE Repository
Search by
[accession number]
[description, ID or gene]
[author names]
[spot ID / serial number]
[identification methods]
[pI / Mw range]
[combined fields]
Maps
[experimental info]
[protein list]
[graphical interface]
Databases
0001
0002
0003
0004
0005
0006
0007
0008
0009
0010
0011
0012
0014
0017
0018
0019
0020
0021
0022
0023
0024
0026
0027
0029
0030
0031
0032
0034
0035
0036
0037
0038
0039
0040
0042
0043
0044
0046
0047
0050
0051
0053
0054
0056
0059
0061
0062
0063
0066
0068
0069
0076
0077
0080
0084
0085
0088
use 'Ctrl' to select several
databases
Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
P21575
World-2DPAGE Repository
(0004):
P21575
P21575
General information about the entry
View entry in simple text format
Entry name
DYN1_RAT
Primary accession number
P21575
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Dynamin-1; EC=3.6.5.5; AltName: Full=B-dynamin; AltName: Full=D100; AltName: Full=Dynamin, brain;.
Gene name
Name=Dnm1
Synonyms=Dnm
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 126
:
pI=6.38; Mw=95000
[identification data]
SPOT 127
:
pI=6.34; Mw=95000
[identification data]
SPOT 129
:
pI=6.27; Mw=95000
[identification data]
MAPPING (identification):
SPOT
126
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
127
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
129
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
P21575; DYN1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
DYN1_RAT
Primary accession number
P21575
Sequence was last modified on
June 10, 2008 (version 2)
Annotations were last modified on
November 16, 2011 (version 116)
Name and origin of the protein
Description
RecName: Full=Dynamin-1; EC=3.6.5.5; AltName: Full=B-dynamin; AltName: Full=D100; AltName: Full=Dynamin, brain;
Gene name
Name=Dnm1
Synonyms=Dnm
Encoded on
Name=Dnm1; Synonyms=Dnm
Keywords
3D-structure
;
Alternative splicing
;
Complete proteome
;
Cytoplasm
;
Cytoskeleton
;
Direct protein sequencing
;
Endocytosis
;
Golgi apparatus
;
GTP-binding
;
Hydrolase
;
Microtubule
;
Motor protein
;
Nucleotide-binding
;
Phosphoprotein
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
X54531; CAA38397.1
; -; mRNA
EMBL
CO398357; -
; NOT_ANNOTATED_CDS; mRNA
EMBL
CB583951; -
; NOT_ANNOTATED_CDS; mRNA
EMBL
CB708564; -
; NOT_ANNOTATED_CDS; mRNA
IPI
IPI00558839; -
; .
IPI
IPI00782657; -
; .
IPI
IPI00896118; -
; .
IPI
IPI00896147; -
; .
IPI
IPI00896174; -
; .
IPI
IPI00896199; -
; .
IPI
IPI00896219; -
; .
IPI
IPI00952286; -
; .
PIR
S11508; S11508
; .
RefSeq
NP_542420.1; NM_080689.4
; .
UniGene
Rn.10354; -
; .
PDB
2AKA; X-ray
; 1.90 A; B=6-304
PDB
3ZVR; X-ray
; 3.10 A; A=1-752
PDBsum
2AKA; -
; .
PDBsum
3ZVR; -
; .
ProteinModelPortal
P21575; -
; .
SMR
P21575; 6-304
; 518-630; .
IntAct
P21575; 6
; .
MINT
MINT-95899; -
; .
STRING
P21575; -
; .
PhosphoSite
P21575; -
; .
World-2DPAGE
0004:P21575; -
; .
PRIDE
P21575; -
; .
Ensembl
ENSRNOT00000042762; ENSRNOP00000047444
; ENSRNOG00000033835; .
Ensembl
ENSRNOT00000060325; ENSRNOP00000057073
; ENSRNOG00000033835; .
Ensembl
ENSRNOT00000068349; ENSRNOP00000061825
; ENSRNOG00000033835; .
GeneID
140694; -
; .
KEGG
rno:140694; -
; .
CTD
1759; -
; .
RGD
71096; Dnm1
; .
eggNOG
roNOG10695; -
; .
GeneTree
ENSGT00600000084144; -
; .
HOVERGEN
HBG107833; -
; .
BRENDA
3.6.5.5; 5301
; .
Reactome
REACT_111984; Signal Transduction
; .
NextBio
620679; -
; .
PMAP-CutDB
P21575; -
; .
ArrayExpress
P21575; -
; .
Genevestigator
P21575; -
; .
GermOnline
ENSRNOG00000033835; Rattus norvegicus
; .
GO
GO:0005794; C:Golgi apparatus
; IEA:UniProtKB-SubCell; .
GO
GO:0005874; C:microtubule
; IEA:UniProtKB-KW; .
GO
GO:0005886; C:plasma membrane
; TAS:Reactome; .
GO
GO:0005525; F:GTP binding
; IEA:UniProtKB-KW; .
GO
GO:0003924; F:GTPase activity
; IEA:InterPro; .
GO
GO:0042802; F:identical protein binding
; TAS:RGD; .
GO
GO:0008022; F:protein C-terminus binding
; IPI:RGD; .
GO
GO:0032403; F:protein complex binding
; IDA:RGD; .
GO
GO:0031623; P:receptor internalization
; IMP:UniProtKB; .
InterPro
IPR022812; Dynamin
; .
InterPro
IPR000375; Dynamin_central
; .
InterPro
IPR001401; Dynamin_GTPase
; .
InterPro
IPR019762; Dynamin_GTPase_CS
; .
InterPro
IPR003130; GED
; .
InterPro
IPR020850; GTPase_effector_domain_GED
; .
InterPro
IPR011993; PH_type
; .
InterPro
IPR001849; Pleckstrin_homology
; .
Gene3D
G3DSA:2.30.29.30; PH_type
; 2; .
KO
K01528; -
; .
Pfam
PF01031; Dynamin_M
; 1; .
Pfam
PF00350; Dynamin_N
; 1; .
Pfam
PF02212; GED
; 1; .
Pfam
PF00169; PH
; 1; .
PRINTS
PR00195; DYNAMIN
; .
SMART
SM00053; DYNc
; 1; .
SMART
SM00302; GED
; 1; .
SMART
SM00233; PH
; 1; .
PROSITE
PS00410; DYNAMIN
; 1; .
PROSITE
PS51388; GED
; 1; .
PROSITE
PS50003; PH_DOMAIN
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server