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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: P21807 World-2DPAGE Repository (0030):  P21807 P21807 General information about the entry View entry in simple text format Entry name PERI_RAT Primary accession number P21807 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description RecName: Full=Peripherin;. Gene name Name=Prph Synonyms=Prph1 Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 803: pI=5.28; Mw=69065   [identification data] SPOT 809: pI=5.36; Mw=68589   [identification data] SPOT 852: pI=5.34; Mw=67646   [identification data] SPOT 863: pI=5.52; Mw=67087   [identification data] SPOT 868: pI=5.43; Mw=66902   [identification data] IDENTIFICATION: SPOT 803: Mascot protein score=151. Number of peptides=4 [1] SPOT 809: Mascot protein score=237. Number of peptides=5 [1]; SPOT 852: Mascot protein score=53. Number of peptides=3 [1]; SPOT 863: Mascot protein score=151. Number of peptides=4 [1]; SPOT 868: Mascot protein score=67. Number of peptides=3 [1]. MAPPING (identification): SPOT 803: Tandem mass spectrometry [1]; SPOT 809: Tandem mass spectrometry [1]; SPOT 852: Tandem mass spectrometry [1]; SPOT 863: Tandem mass spectrometry [1]; SPOT 868: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/Swiss-Prot P21807; PERI_RAT. World-2DPAGE Repository P21807; PERI_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name PERI_RAT Primary accession number P21807 Sequence was last modified on  May 1, 1991 (version 1) Annotations were last modified on  September 21, 2011 (version 92) Name and origin of the protein Description RecName: Full=Peripherin; Gene name Name=Prph Synonyms=Prph1 Encoded on Name=Prph; Synonyms=Prph1 Keywords Coiled coil; Complete proteome; Direct protein sequencing; Intermediate filament; Nitration; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M26232; AAA41829.1; -; Genomic_DNA EMBL AF031878; AAB87067.1; -; mRNA IPI IPI00326582; -; . PIR JN0016; JN0016; . UniGene Rn.11086; -; . ProteinModelPortal P21807; -; . SMR P21807; 92-128; 321-399; . IntAct P21807; 1; . MINT MINT-7138936; -; . STRING P21807; -; . PhosphoSite P21807; -; . PRIDE P21807; -; . UCSC BC100656; rat; . RGD 3414; Prph; . eggNOG roNOG11948; -; . HOVERGEN HBG013015; -; . OrthoDB EOG4JWVDP; -; . ArrayExpress P21807; -; . Genevestigator P21807; -; . GermOnline ENSRNOG00000015643; Rattus norvegicus; . GO GO:0043025; C:neuronal cell body; IDA:MGI; . GO GO:0045098; C:type III intermediate filament; IDA:RGD; . GO GO:0005515; F:protein binding; IPI:IntAct; . GO GO:0005198; F:structural molecule activity; IEA:InterPro; . GO GO:0045104; P:intermediate filament cytoskeleton organization; IMP:RGD; . InterPro IPR016044; F; . InterPro IPR001664; IF; . InterPro IPR006821; Intermed_filament_DNA-bd; . InterPro IPR018039; Intermediate_filament_CS; . InterPro IPR002957; Keratin_I; . PANTHER PTHR23239; IF; 1; . Pfam PF00038; Filament; 1; . Pfam PF04732; Filament_head; 1; . PRINTS PR01248; TYPE1KERATIN; . PROSITE PS00226; IF; 1; . World-2DPAGE Repository (search AC)