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Searching in 'World-2DPAGE Repository [0030]' for entry matching: P21807




World-2DPAGE Repository (0030):  P21807

P21807


General information about the entry
View entry in simple text format
Entry namePERI_RAT
Primary accession numberP21807
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Peripherin;.
Gene nameName=Prph
Synonyms=Prph1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=5.28; Mw=69065  [identification data]
pI=5.36; Mw=68589  [identification data]
pI=5.34; Mw=67646  [identification data]
pI=5.52; Mw=67087  [identification data]
pI=5.43; Mw=66902  [identification data]

IDENTIFICATION: SPOT 803: Mascot protein score=151. Number of peptides=4 [1]
SPOT 809: Mascot protein score=237. Number of peptides=5 [1]; SPOT 852: Mascot protein score=53. Number of peptides=3 [1]; SPOT 863: Mascot protein score=151. Number of peptides=4 [1]; SPOT 868: Mascot protein score=67. Number of peptides=3 [1].
MAPPING (identification):
SPOT 803: Tandem mass spectrometry [1];
SPOT 809: Tandem mass spectrometry [1];
SPOT 852: Tandem mass spectrometry [1];
SPOT 863: Tandem mass spectrometry [1];
SPOT 868: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtP21807; PERI_RAT.
World-2DPAGE RepositoryP21807; PERI_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry namePERI_RAT
Primary accession numberP21807
Sequence was last modified on May 1, 1991 (version 1)
Annotations were last modified on September 21, 2011 (version 92)
Name and origin of the protein
DescriptionRecName: Full=Peripherin;
Gene nameName=Prph
Synonyms=Prph1
Encoded onName=Prph; Synonyms=Prph1
KeywordsCoiled coil; Complete proteome; Direct protein sequencing; Intermediate filament; Nitration; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM26232; AAA41829.1; -; Genomic_DNA
EMBLAF031878; AAB87067.1; -; mRNA
IPIIPI00326582; -; .
PIRJN0016; JN0016; .
UniGeneRn.11086; -; .
ProteinModelPortalP21807; -; .
SMRP21807; 92-128; 321-399; .
IntActP21807; 1; .
MINTMINT-7138936; -; .
STRINGP21807; -; .
PhosphoSiteP21807; -; .
PRIDEP21807; -; .
UCSCBC100656; rat; .
RGD3414; Prph; .
eggNOGroNOG11948; -; .
HOVERGENHBG013015; -; .
OrthoDBEOG4JWVDP; -; .
ArrayExpressP21807; -; .
GenevestigatorP21807; -; .
GermOnlineENSRNOG00000015643; Rattus norvegicus; .
GOGO:0043025; C:neuronal cell body; IDA:MGI; .
GOGO:0045098; C:type III intermediate filament; IDA:RGD; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0005198; F:structural molecule activity; IEA:InterPro; .
GOGO:0045104; P:intermediate filament cytoskeleton organization; IMP:RGD; .
InterProIPR016044; F; .
InterProIPR001664; IF; .
InterProIPR006821; Intermed_filament_DNA-bd; .
InterProIPR018039; Intermediate_filament_CS; .
InterProIPR002957; Keratin_I; .
PANTHERPTHR23239; IF; 1; .
PfamPF00038; Filament; 1; .
PfamPF04732; Filament_head; 1; .
PRINTSPR01248; TYPE1KERATIN; .
PROSITEPS00226; IF; 1; .


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