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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0030]' for entry
matching:
P21807
World-2DPAGE Repository
(0030):
P21807
P21807
General information about the entry
View entry in simple text format
Entry name
PERI_RAT
Primary accession number
P21807
integrated into World-2DPAGE Repository (0030) on
November 9, 2010 (release 1)
2D Annotations were last modified on
June 21, 2011 (version 2)
General Annotations were last modified on
November 23, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Peripherin;.
Gene name
Name=Prph
Synonyms=Prph1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000006
;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_INS1E_4-7
{INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
map experimental info
RAT_INS1E_4-7
MAP LOCATIONS:
SPOT 803
:
pI=5.28; Mw=69065
[identification data]
SPOT 809
:
pI=5.36; Mw=68589
[identification data]
SPOT 852
:
pI=5.34; Mw=67646
[identification data]
SPOT 863
:
pI=5.52; Mw=67087
[identification data]
SPOT 868
:
pI=5.43; Mw=66902
[identification data]
IDENTIFICATION:
SPOT 803: Mascot protein score=151. Number of peptides=4 [
1
]
SPOT 809: Mascot protein score=237. Number of peptides=5 [
1
]; SPOT 852: Mascot protein score=53. Number of peptides=3 [
1
]; SPOT 863: Mascot protein score=151. Number of peptides=4 [
1
]; SPOT 868: Mascot protein score=67. Number of peptides=3 [
1
].
MAPPING (identification):
SPOT
803
:
Tandem mass spectrometry
[
1
];
SPOT
809
:
Tandem mass spectrometry
[
1
];
SPOT
852
:
Tandem mass spectrometry
[
1
];
SPOT
863
:
Tandem mass spectrometry
[
1
];
SPOT
868
:
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-Prot
P21807; PERI_RAT.
World-2DPAGE Repository
P21807; PERI_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
PERI_RAT
Primary accession number
P21807
Sequence was last modified on
May 1, 1991 (version 1)
Annotations were last modified on
September 21, 2011 (version 92)
Name and origin of the protein
Description
RecName: Full=Peripherin;
Gene name
Name=Prph
Synonyms=Prph1
Encoded on
Name=Prph; Synonyms=Prph1
Keywords
Coiled coil
;
Complete proteome
;
Direct protein sequencing
;
Intermediate filament
;
Nitration
;
Phosphoprotein
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
M26232; AAA41829.1
; -; Genomic_DNA
EMBL
AF031878; AAB87067.1
; -; mRNA
IPI
IPI00326582; -
; .
PIR
JN0016; JN0016
; .
UniGene
Rn.11086; -
; .
ProteinModelPortal
P21807; -
; .
SMR
P21807; 92-128
; 321-399; .
IntAct
P21807; 1
; .
MINT
MINT-7138936; -
; .
STRING
P21807; -
; .
PhosphoSite
P21807; -
; .
PRIDE
P21807; -
; .
UCSC
BC100656; rat
; .
RGD
3414; Prph
; .
eggNOG
roNOG11948; -
; .
HOVERGEN
HBG013015; -
; .
OrthoDB
EOG4JWVDP; -
; .
ArrayExpress
P21807; -
; .
Genevestigator
P21807; -
; .
GermOnline
ENSRNOG00000015643; Rattus norvegicus
; .
GO
GO:0043025; C:neuronal cell body
; IDA:MGI; .
GO
GO:0045098; C:type III intermediate filament
; IDA:RGD; .
GO
GO:0005515; F:protein binding
; IPI:IntAct; .
GO
GO:0005198; F:structural molecule activity
; IEA:InterPro; .
GO
GO:0045104; P:intermediate filament cytoskeleton organization
; IMP:RGD; .
InterPro
IPR016044; F
; .
InterPro
IPR001664; IF
; .
InterPro
IPR006821; Intermed_filament_DNA-bd
; .
InterPro
IPR018039; Intermediate_filament_CS
; .
InterPro
IPR002957; Keratin_I
; .
PANTHER
PTHR23239; IF
; 1; .
Pfam
PF00038; Filament
; 1; .
Pfam
PF04732; Filament_head
; 1; .
PRINTS
PR01248; TYPE1KERATIN
; .
PROSITE
PS00226; IF
; 1; .
World-2DPAGE Repository (search AC)
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