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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
P28075
World-2DPAGE Repository
(0014):
P28075
P28075
General information about the entry
View entry in simple text format
Entry name
PSB5_RAT
Primary accession number
P28075
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Proteasome subunit beta type-5; EC=3.4.25.1; AltName: Full=Macropain epsilon chain; AltName: Full=Multicatalytic endopeptidase complex epsilon chain; AltName: Full=Proteasome chain 6; AltName: Full=Proteasome epsilon chain; AltName: Full=Proteasome subunit X; Flags: Precursor;.
Gene name
Name=Psmb5
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3211
:
pI=8.34; Mw=23000
[identification data]
IDENTIFICATION:
SPOT 3211: SeqCov=43%. MascotPMF=70 [
1
].
MAPPING (identification):
SPOT
3211
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
P28075; PSB5_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
PSB5_RAT
Primary accession number
P28075
Sequence was last modified on
April 29, 2008 (version 3)
Annotations were last modified on
November 16, 2011 (version 99)
Name and origin of the protein
Description
RecName: Full=Proteasome subunit beta type-5; EC=3.4.25.1; AltName: Full=Macropain epsilon chain; AltName: Full=Multicatalytic endopeptidase complex epsilon chain; AltName: Full=Proteasome chain 6; AltName: Full=Proteasome epsilon chain; AltName: Full=Proteasome subunit X; Flags: Precursor;
Gene name
Name=Psmb5
Encoded on
Name=Psmb5
Keywords
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Hydrolase
;
Nucleus
;
Protease
;
Proteasome
;
Reference proteome
;
Threonine protease
;
Zymogen
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
D45247; BAA08204.1
; ALT_SEQ; mRNA
EMBL
CH474049; EDM14180.1
; -; Genomic_DNA
IPI
IPI00869998; -
; .
PIR
S09087; S09087
; .
RefSeq
NP_001099197.2; NM_001105727.2
; .
UniGene
Rn.2; -
; .
ProteinModelPortal
P28075; -
; .
SMR
P28075; 60-259
; .
IntAct
P28075; 1
; .
STRING
P28075; -
; .
MEROPS
T01.012; -
; .
PhosphoSite
P28075; -
; .
PRIDE
P28075; -
; .
GeneID
29425; -
; .
KEGG
rno:29425; -
; .
CTD
5693; -
; .
RGD
61879; Psmb5
; .
eggNOG
roNOG06771; -
; .
GeneTree
ENSGT00510000046395; -
; .
HOVERGEN
HBG108297; -
; .
InParanoid
P28075; -
; .
OrthoDB
EOG4M91S6; -
; .
ArrayExpress
P28075; -
; .
Genevestigator
P28075; -
; .
GermOnline
ENSRNOG00000013386; Rattus norvegicus
; .
GO
GO:0005737; C:cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0005634; C:nucleus
; IEA:UniProtKB-SubCell; .
GO
GO:0004298; F:threonine-type endopeptidase activity
; IEA:UniProtKB-KW; .
InterPro
IPR000243; Pept_T1A_subB
; .
InterPro
IPR016050; Proteasome_bsu_CS
; .
InterPro
IPR001353; Proteasome_sua/b
; .
InterPro
IPR023333; Proteasome_suB-type
; .
KO
K02737; -
; .
Pfam
PF00227; Proteasome
; 1; .
PRINTS
PR00141; PROTEASOME
; .
PROSITE
PS00854; PROTEASOME_B_1
; 1; .
PROSITE
PS51476; PROTEASOME_B_2
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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Make2D-DB II
package (
ver. 3.10.2
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