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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0022]' for entry matching: P31000 World-2DPAGE Repository (0022):  P31000 P31000 General information about the entry View entry in simple text format Entry name VIME_RAT Primary accession number P31000 integrated into World-2DPAGE Repository (0022) on  May 7, 2010 (release 1) 2D Annotations were last modified on June 22, 2011 (version 2) General Annotations were last modified on  November 24, 2011 (version 2) Name and origin of the protein Description RecName: Full=Vimentin;. Gene name Name=Vim Annotated species Rattus [TaxID: 10114] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000593; Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L. ''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity'' Proteomics 11(16):3369-3379 (2011) 2D PAGE maps for identified proteins How to interpret a protein HCR_LCR_HEART {HCR LCR Cardiac Map} Rattus Tissue: Heart   map experimental info   HCR_LCR_HEART MAP LOCATIONS: SPOT 15: pI=5.06; Mw=53757   [identification data] IDENTIFICATION: SPOT 15: SeqCov=24%. Peptides MS=9/20. Mascot PMF Score=162 [1]. MAPPING (identification): SPOT 15: Peptide mass fingerprinting [1]. Copyright Data from Dr. Jatin Burniston, Liverpool John Moores University, UK Cross-references UniProtKB/Swiss-Prot P31000; VIME_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name VIME_RAT Primary accession number P31000 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  November 16, 2011 (version 104) Name and origin of the protein Description RecName: Full=Vimentin; Gene name Name=Vim Encoded on Name=Vim Keywords Acetylation; Coiled coil; Complete proteome; Cytoplasm; Direct protein sequencing; Intermediate filament; Nucleus; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X62952; CAA44722.1; -; mRNA EMBL BC061847; AAH61847.1; -; mRNA EMBL M84481; AAA42339.1; -; mRNA IPI IPI00230941; -; . PIR S22119; S22119; . RefSeq NP_112402.1; NM_031140.1; . UniGene Rn.2710; -; . ProteinModelPortal P31000; -; . SMR P31000; 101-138; 328-406; . IntAct P31000; 5; . STRING P31000; -; . PhosphoSite P31000; -; . PRIDE P31000; -; . GeneID 81818; -; . KEGG rno:81818; -; . UCSC NM_031140; rat; . CTD 7431; -; . RGD 621646; Vim; . eggNOG roNOG09368; -; . GeneTree ENSGT00560000076592; -; . HOVERGEN HBG013015; -; . InParanoid P31000; -; . OrthoDB EOG4GHZPD; -; . NextBio 615731; -; . ArrayExpress P31000; -; . Genevestigator P31000; -; . GermOnline ENSRNOG00000018087; Rattus norvegicus; . GO GO:0030424; C:axon; IDA:RGD; . GO GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell; . GO GO:0045098; C:type III intermediate filament; TAS:RGD; . GO GO:0019901; F:protein kinase binding; IPI:RGD; . GO GO:0005200; F:structural constituent of cytoskeleton; ISS:UniProtKB; . InterPro IPR016044; F; . InterPro IPR001664; IF; . InterPro IPR006821; Intermed_filament_DNA-bd; . InterPro IPR018039; Intermediate_filament_CS; . KO K07606; -; . PANTHER PTHR23239; IF; 1; . Pfam PF00038; Filament; 1; . Pfam PF04732; Filament_head; 1; . PROSITE PS00226; IF; 1; . World-2DPAGE Repository (search AC)