resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]


use 'Ctrl' to select several

Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0019]' for entry matching: P31399

World-2DPAGE Repository (0019):  P31399


General information about the entry
View entry in simple text format
Entry nameATP5H_RAT
Primary accession numberP31399
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit d, mitochondrial; Short=ATPase subunit d;.
Gene nameName=Atp5h
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
  map experimental info

pI=6.16; Mw=18763  [identification data]

IDENTIFICATION: SPOT 831: Peptides number=19. SeqCov=85.7%. MOWSE score=2.93E+14 [1].
MAPPING (identification):
SPOT 831: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Willard Freeman, Penn State College of Medicine, USA
UniProtKB/Swiss-ProtP31399; ATP5H_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameATP5H_RAT
Primary accession numberP31399
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on November 16, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit d, mitochondrial; Short=ATPase subunit d;
Gene nameName=Atp5h
Encoded onName=Atp5h; Synonyms=Atp5jd
KeywordsAcetylation; CF(0); Complete proteome; Direct protein sequencing; Hydrogen ion transport; Ion transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Reference proteome; Transport.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLD10021; BAA00911.1; -; mRNA
EMBLD13120; BAA02422.1; -; mRNA
EMBLBC059139; AAH59139.1; -; mRNA
EMBLBC078846; AAH78846.1; -; mRNA
IPIIPI00230838; -; .
PIRJS0739; JS0739; .
RefSeqNP_062256.1; NM_019383.2; .
UniGeneRn.80; -; .
ProteinModelPortalP31399; -; .
SMRP31399; 4-124; .
IntActP31399; 1; .
STRINGP31399; -; .
PhosphoSiteP31399; -; .
World-2DPAGE0004:P31399; -; .
PRIDEP31399; -; .
GeneID641434; -; .
KEGGrno:641434; -; .
CTD10476; -; .
RGD620083; Atp5h; .
eggNOGmaNOG18111; -; .
HOVERGENHBG050612; -; .
PhylomeDBP31399; -; .
NextBio714689; -; .
GenevestigatorP31399; -; .
GOGO:0000276; C:mitochondrial proton-transporting ATP synthase complex; coupling factor F(o); IDA:RGD
GOGO:0015078; F:hydrogen ion transmembrane transporter activity; TAS:RGD; .
GOGO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro; .
InterProIPR008689; ATPase_F0-cplx_dsu_mt; .
KOK02138; -; .
PfamPF05873; Mt_ATP-synt_D; 1; .
PIRSFPIRSF005514; ATPase_F0_D_mt; 1; .

World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server