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World-2DPAGE Repository

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Searching in 'World-2DPAGE Repository [0014]' for entry matching: P35435

World-2DPAGE Repository (0014):  P35435


General information about the entry
View entry in simple text format
Entry nameATPG_RAT
Primary accession numberP35435
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit gamma, mitochondrial; AltName: Full=F-ATPase gamma subunit;.
Gene nameName=Atp5c1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
  map experimental info

pI=8.36; Mw=31000  [identification data]

IDENTIFICATION: SPOT 3368: SeqCov=24%. MascotPMF=49 [1].
MAPPING (identification):
SPOT 3368: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP35435; ATPG_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameATPG_RAT
Primary accession numberP35435
Sequence was last modified on February 1, 1995 (version 2)
Annotations were last modified on September 21, 2011 (version 100)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit gamma, mitochondrial; AltName: Full=F-ATPase gamma subunit;
Gene nameName=Atp5c1
Encoded onName=Atp5c1; Synonyms=Atp5c
Keywords3D-structure; Acetylation; ATP synthesis; CF(1); Complete proteome; Direct protein sequencing; Hydrogen ion transport; Ion transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Phosphoprotein; Reference proteome; Transport.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLL19927; AAA41776.1; -; mRNA
IPIIPI00948302; -; .
PIRA33160; A33160; .
UniGeneRn.63959; -; .
PDB1MAB; X-ray; 2.80 A; G=5-273
PDB2F43; X-ray; 3.00 A; G=1-273
PDBsum1MAB; -; .
PDBsum2F43; -; .
ProteinModelPortalP35435; -; .
SMRP35435; 1-272; .
IntActP35435; 1; .
STRINGP35435; -; .
PhosphoSiteP35435; -; .
World-2DPAGE0004:P35435; -; .
PRIDEP35435; -; .
UCSCAY539950; rat; .
RGD620011; Atp5c1; .
eggNOGroNOG12020; -; .
HOVERGENHBG000933; -; .
ArrayExpressP35435; -; .
GenevestigatorP35435; -; .
GermOnlineENSRNOG00000019223; Rattus norvegicus; .
GOGO:0000275; C:mitochondrial proton-transporting ATP synthase complex; catalytic core F(1); IDA:RGD
GOGO:0046933; F:hydrogen ion transporting ATP synthase activity; rotational mechanism; IEA:InterPro
GOGO:0046961; F:proton-transporting ATPase activity; rotational mechanism; IEA:InterPro
GOGO:0006172; P:ADP biosynthetic process; IDA:RGD; .
GOGO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro; .
GOGO:0006119; P:oxidative phosphorylation; NAS:RGD; .
InterProIPR000131; ATPase_F1-cplx_gsu; .
InterProIPR023632; ATPase_F1_gsu_CS; .
InterProIPR023633; ATPase_F1_gsu_dom; .
PANTHERPTHR11693; ATPase_F1_gamma; 1; .
PfamPF00231; ATP-synt; 1; .
SUPFAMSSF52943; ATPase_gamma; 1; .
TIGRFAMsTIGR01146; ATPsyn_F1gamma; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server