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Searching in 'World-2DPAGE Repository [0004]' for entry matching: P37377




World-2DPAGE Repository (0004):  P37377

P37377


General information about the entry
View entry in simple text format
Entry nameSYUA_RAT
Primary accession numberP37377
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Alpha-synuclein;.
Gene nameName=Snca
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info 		 
OB21DSUB

MAP LOCATIONS:
pI=4.71; Mw=18000  [identification data]

MAPPING (identification):
SPOT 758: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtP37377; SYUA_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameSYUA_RAT
Primary accession numberP37377
Secondary accession number(s) P37378 Q53YM9
Sequence was last modified on October 1, 1994 (version 1)
Annotations were last modified on December 14, 2011 (version 93)
Name and origin of the protein
DescriptionRecName: Full=Alpha-synuclein;
Gene nameName=Snca
Encoded onName=Snca
KeywordsAlternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Reference proteome; Repeat; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLS73007; AAB20688.1; -; mRNA
EMBLS73008; AAB20689.1; -; mRNA
EMBLS73009; AAB20690.1; -; mRNA
EMBLAF007758; AAC16026.1; -; mRNA
EMBLAY550005; AAS55694.1; -; mRNA
EMBLAY550006; AAS55695.1; -; mRNA
EMBLBC087682; AAH87682.1; -; mRNA
IPIIPI00205493; -; .
IPIIPI00231846; -; .
IPIIPI00388903; -; .
PIRB43959; B43959; .
RefSeqNP_062042.1; NM_019169.2; .
UniGeneRn.1827; -; .
ProteinModelPortalP37377; -; .
SMRP37377; 1-140; .
STRINGP37377; -; .
PhosphoSiteP37377; -; .
World-2DPAGE0004:P37377; -; .
PRIDEP37377; -; .
EnsemblENSRNOT00000039247; ENSRNOP00000030609; ENSRNOG00000008656; .
EnsemblENSRNOT00000042485; ENSRNOP00000040281; ENSRNOG00000008656; .
GeneID29219; -; .
KEGGrno:29219; -; .
UCSCNM_019169; rat; .
CTD6622; -; .
RGD3729; Snca; .
eggNOGroNOG18011; -; .
HOVERGENHBG000481; -; .
OMAPENEAYE; -; .
OrthoDBEOG4FFD3B; -; .
NextBio608409; -; .
ArrayExpressP37377; -; .
GenevestigatorP37377; -; .
GermOnlineENSRNOG00000008656; Rattus norvegicus; .
GOGO:0030659; C:cytoplasmic vesicle membrane; IDA:BHF-UCL; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0005792; C:microsome; IDA:RGD; .
GOGO:0005739; C:mitochondrion; IDA:BHF-UCL; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0008021; C:synaptic vesicle; IDA:RGD; .
GOGO:0043195; C:terminal button; IDA:RGD; .
GOGO:0008017; F:microtubule binding; IDA:UniProtKB; .
GOGO:0043274; F:phospholipase binding; IPI:RGD; .
GOGO:0005543; F:phospholipid binding; IDA:RGD; .
GOGO:0019904; F:protein domain specific binding; IPI:RGD; .
GOGO:0047485; F:protein N-terminus binding; IDA:RGD; .
GOGO:0048148; P:behavioral response to cocaine; IMP:RGD; .
GOGO:0045963; P:negative regulation of dopamine metabolic process; IMP:BHF-UCL; .
GOGO:0043524; P:negative regulation of neuron apoptosis; IMP:RGD; .
GOGO:0001933; P:negative regulation of protein phosphorylation; IMP:BHF-UCL; .
GOGO:0014059; P:regulation of dopamine secretion; IEA:InterPro; .
InterProIPR001058; Synuclein; .
InterProIPR002460; Synuclein_alpha; .
Gene3DG3DSA:1.10.287.700; Synuclein; 1; .
KOK04528; -; .
PANTHERPTHR13820; Synuclein; 1; .
PfamPF01387; Synuclein; 1; .
PRINTSPR01212; ASYNUCLEIN; .
PRINTSPR01211; SYNUCLEIN; .


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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server