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World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.

World-2DPAGE Repository 
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Searching in 'World-2DPAGE Repository [0022]' for entry matching: P42930




World-2DPAGE Repository (0022):  P42930

P42930


General information about the entry
View entry in simple text format
Entry nameHSPB1_RAT
Primary accession numberP42930
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Heat shock protein beta-1; Short=HspB1; AltName: Full=Heat shock 27 kDa protein; Short=HSP 27;.
Gene nameName=Hspb1
Synonyms=Hsp27
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=6.12; Mw=22936  [identification data]
pI=6.12; Mw=22936  [identification data]

IDENTIFICATION: SPOT 851: SeqCov=37.9%. Peptides MS=9/20. Mascot PMF Score=86 [1]
SPOT 895: SeqCov=37.4%. Peptides MS=7/20. Mascot PMF Score=70 [1].
PEPTIDE EVIDENCE: SPOT 851: 29-LFDQAFGVPR-38 (85) / 176-AVTQSAEITIPVTFEAR-192 (109) [1]
SPOT 895: 13-SPSWEPFR-20 (53) / 29-LFDQAFGVPR-38 (85) / 176-AVTQSAEITIPVTFEAR-192 (81) [1].
MAPPING (identification):
SPOT 851: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 895: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP42930; HSPB1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameHSPB1_RAT
Primary accession numberP42930
Secondary accession number(s) Q63922 Q9QWA8
Sequence was last modified on November 1, 1995 (version 1)
Annotations were last modified on November 16, 2011 (version 94)
Name and origin of the protein
DescriptionRecName: Full=Heat shock protein beta-1; Short=HspB1; AltName: Full=Heat shock 27 kDa protein; Short=HSP 27;
Gene nameName=Hspb1
Synonyms=Hsp27
Encoded onName=Hspb1; Synonyms=Hsp27
KeywordsAcetylation; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Nucleus; Phosphoprotein; Reference proteome; Stress response.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM86389; AAA41353.1; -; mRNA
EMBLS67755; AAB29536.2; -; Genomic_DNA
IPIIPI00201586; -; .
PIRJN0924; JN0924; .
RefSeqNP_114176.3; NM_031970.3; .
UniGeneRn.3841; -; .
ProteinModelPortalP42930; -; .
IntActP42930; 1; .
MINTMINT-4542769; -; .
STRINGP42930; -; .
PhosphoSiteP42930; -; .
PRIDEP42930; -; .
GeneID24471; -; .
KEGGrno:24471; -; .
UCSCM86389; rat; .
CTD3315; -; .
RGD61306; Hspb1; .
eggNOGmaNOG17820; -; .
GeneTreeENSGT00550000074302; -; .
HOVERGENHBG054766; -; .
InParanoidP42930; -; .
OrthoDBEOG4DR9DF; -; .
ArrayExpressP42930; -; .
GenevestigatorP42930; -; .
GermOnlineENSRNOG00000023546; Rattus norvegicus; .
GOGO:0005634; C:nucleus; ISS:UniProtKB; .
GOGO:0000502; C:proteasome complex; IDA:RGD; .
GOGO:0005819; C:spindle; IEA:UniProtKB-SubCell; .
GOGO:0043130; F:ubiquitin binding; IDA:RGD; .
GOGO:0006916; P:anti-apoptosis; TAS:RGD; .
GOGO:0006950; P:response to stress; IEA:UniProtKB-KW; .
InterProIPR001436; Alpha-crystallin/HSP; .
InterProIPR002068; Hsp20; .
InterProIPR008978; HSP20-like_chaperone; .
KOK04455; -; .
PfamPF00011; HSP20; 1; .
PIRSFPIRSF036514; Sm_HSP_B1; 1; .
PRINTSPR00299; ACRYSTALLIN; .
SUPFAMSSF49764; HSP20_chap; 1; .
PROSITEPS01031; HSP20; 1; .





Searching in 'World-2DPAGE Repository [0001]' for entry matching: P42930




World-2DPAGE Repository (0001):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0001)



Searching in 'World-2DPAGE Repository [0002]' for entry matching: P42930




World-2DPAGE Repository (0002):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0002)



Searching in 'World-2DPAGE Repository [0003]' for entry matching: P42930




World-2DPAGE Repository (0003):  P42930

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Searching in 'World-2DPAGE Repository [0004]' for entry matching: P42930




World-2DPAGE Repository (0004):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0004)



Searching in 'World-2DPAGE Repository [0005]' for entry matching: P42930




World-2DPAGE Repository (0005):  P42930

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Searching in 'World-2DPAGE Repository [0006]' for entry matching: P42930




World-2DPAGE Repository (0006):  P42930

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World-2DPAGE Repository (0007):  P42930

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World-2DPAGE Repository (0008):  P42930

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World-2DPAGE Repository (0009):  P42930

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Searching in 'World-2DPAGE Repository [0010]' for entry matching: P42930




World-2DPAGE Repository (0010):  P42930

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Searching in 'World-2DPAGE Repository [0011]' for entry matching: P42930




World-2DPAGE Repository (0011):  P42930

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Searching in 'World-2DPAGE Repository [0012]' for entry matching: P42930




World-2DPAGE Repository (0012):  P42930

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Searching in 'World-2DPAGE Repository [0014]' for entry matching: P42930




World-2DPAGE Repository (0014):  P42930

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Searching in 'World-2DPAGE Repository [0017]' for entry matching: P42930




World-2DPAGE Repository (0017):  P42930

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World-2DPAGE Repository (0018):  P42930

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Searching in 'World-2DPAGE Repository [0019]' for entry matching: P42930




World-2DPAGE Repository (0019):  P42930

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Searching in 'World-2DPAGE Repository [0020]' for entry matching: P42930




World-2DPAGE Repository (0020):  P42930

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Searching in 'World-2DPAGE Repository [0021]' for entry matching: P42930




World-2DPAGE Repository (0021):  P42930

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Searching in 'World-2DPAGE Repository [0023]' for entry matching: P42930




World-2DPAGE Repository (0023):  P42930

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World-2DPAGE Repository (0024):  P42930

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Searching in 'World-2DPAGE Repository [0026]' for entry matching: P42930




World-2DPAGE Repository (0026):  P42930

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Searching in 'World-2DPAGE Repository [0027]' for entry matching: P42930




World-2DPAGE Repository (0027):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0027)



Searching in 'World-2DPAGE Repository [0029]' for entry matching: P42930




World-2DPAGE Repository (0029):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0029)



Searching in 'World-2DPAGE Repository [0030]' for entry matching: P42930




World-2DPAGE Repository (0030):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0030)



Searching in 'World-2DPAGE Repository [0031]' for entry matching: P42930




World-2DPAGE Repository (0031):  P42930

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Searching in 'World-2DPAGE Repository [0032]' for entry matching: P42930




World-2DPAGE Repository (0032):  P42930

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Searching in 'World-2DPAGE Repository [0034]' for entry matching: P42930




World-2DPAGE Repository (0034):  P42930

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Searching in 'World-2DPAGE Repository [0035]' for entry matching: P42930




World-2DPAGE Repository (0035):  P42930

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Searching in 'World-2DPAGE Repository [0036]' for entry matching: P42930




World-2DPAGE Repository (0036):  P42930

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Searching in 'World-2DPAGE Repository [0037]' for entry matching: P42930




World-2DPAGE Repository (0037):  P42930

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World-2DPAGE Repository (0038):  P42930

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Searching in 'World-2DPAGE Repository [0039]' for entry matching: P42930




World-2DPAGE Repository (0039):  P42930

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World-2DPAGE Repository (0040):  P42930

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Searching in 'World-2DPAGE Repository [0042]' for entry matching: P42930




World-2DPAGE Repository (0042):  P42930

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World-2DPAGE Repository (0043):  P42930

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Searching in 'World-2DPAGE Repository [0044]' for entry matching: P42930




World-2DPAGE Repository (0044):  P42930

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World-2DPAGE Repository (0046):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0046)



Searching in 'World-2DPAGE Repository [0047]' for entry matching: P42930




World-2DPAGE Repository (0047):  P42930

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Searching in 'World-2DPAGE Repository [0050]' for entry matching: P42930




World-2DPAGE Repository (0050):  P42930

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Searching in 'World-2DPAGE Repository [0051]' for entry matching: P42930




World-2DPAGE Repository (0051):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0051)



Searching in 'World-2DPAGE Repository [0053]' for entry matching: P42930




World-2DPAGE Repository (0053):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0053)



Searching in 'World-2DPAGE Repository [0054]' for entry matching: P42930




World-2DPAGE Repository (0054):  P42930

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Searching in 'World-2DPAGE Repository [0056]' for entry matching: P42930




World-2DPAGE Repository (0056):  P42930

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Searching in 'World-2DPAGE Repository [0059]' for entry matching: P42930




World-2DPAGE Repository (0059):  P42930

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Searching in 'World-2DPAGE Repository [0061]' for entry matching: P42930




World-2DPAGE Repository (0061):  P42930

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Searching in 'World-2DPAGE Repository [0062]' for entry matching: P42930




World-2DPAGE Repository (0062):  P42930

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Searching in 'World-2DPAGE Repository [0063]' for entry matching: P42930




World-2DPAGE Repository (0063):  P42930

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Searching in 'World-2DPAGE Repository [0066]' for entry matching: P42930




World-2DPAGE Repository (0066):  P42930

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Searching in 'World-2DPAGE Repository [0068]' for entry matching: P42930




World-2DPAGE Repository (0068):  P42930

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Searching in 'World-2DPAGE Repository [0069]' for entry matching: P42930




World-2DPAGE Repository (0069):  P42930

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Searching in 'World-2DPAGE Repository [0076]' for entry matching: P42930




World-2DPAGE Repository (0076):  P42930

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Searching in 'World-2DPAGE Repository [0077]' for entry matching: P42930




World-2DPAGE Repository (0077):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0077)



Searching in 'World-2DPAGE Repository [0080]' for entry matching: P42930




World-2DPAGE Repository (0080):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0080)



Searching in 'World-2DPAGE Repository [0084]' for entry matching: P42930




World-2DPAGE Repository (0084):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0084)



Searching in 'World-2DPAGE Repository [0085]' for entry matching: P42930




World-2DPAGE Repository (0085):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0085)



Searching in 'World-2DPAGE Repository [0088]' for entry matching: P42930




World-2DPAGE Repository (0088):  P42930

This protein does not exist in the current release of World-2DPAGE Repository (0088)



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server