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Searching in 'World-2DPAGE Repository [0014]' for entry matching: P50475

World-2DPAGE Repository (0014):  P50475


General information about the entry
View entry in simple text format
Entry nameSYAC_RAT
Primary accession numberP50475
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Alanyl-tRNA synthetase, cytoplasmic; EC=; AltName: Full=Alanine--tRNA ligase; Short=AlaRS;.
Gene nameName=Aars
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
  map experimental info

pI=5.60; Mw=80000  [identification data]

IDENTIFICATION: SPOT 2676: SeqCov=35%. MascotPMF=206 [1].
MAPPING (identification):
SPOT 2676: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP50475; SYAC_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameSYAC_RAT
Primary accession numberP50475
Secondary accession number(s) A6IZ80 Q4G057
Sequence was last modified on October 13, 2009 (version 3)
Annotations were last modified on November 16, 2011 (version 68)
Name and origin of the protein
DescriptionRecName: Full=Alanyl-tRNA synthetase, cytoplasmic; EC=; AltName: Full=Alanine--tRNA ligase; Short=AlaRS;
Gene nameName=Aars
Encoded onName=Aars
KeywordsAcetylation; Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Ligase; Metal-binding; Nucleotide-binding; Phosphoprotein; Protein biosynthesis; Reference proteome; RNA-binding; tRNA-binding; Ubl conjugation; Zinc.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLCH473972; EDL92558.1; -; Genomic_DNA
EMBLBC098738; AAH98738.1; -; mRNA
IPIIPI00363563; -; .
PIRS16073; S16073; .
RefSeqNP_001093987.1; NM_001100517.1; .
UniGeneRn.8645; -; .
ProteinModelPortalP50475; -; .
STRINGP50475; -; .
PRIDEP50475; -; .
EnsemblENSRNOT00000025052; ENSRNOP00000025051; ENSRNOG00000018404; .
GeneID292023; -; .
KEGGrno:292023; -; .
CTD16; -; .
RGD1304832; Aars; .
eggNOGroNOG07085; -; .
GeneTreeENSGT00390000016019; -; .
HOVERGENHBG017874; -; .
OrthoDBEOG45X7VC; -; .
ArrayExpressP50475; -; .
GenevestigatorP50475; -; .
GOGO:0005737; C:cytoplasm; IDA:RGD; .
GOGO:0004813; F:alanine-tRNA ligase activity; IDA:RGD; .
GOGO:0016597; F:amino acid binding; IPI:RGD; .
GOGO:0005524; F:ATP binding; IPI:RGD; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0000049; F:tRNA binding; IPI:RGD; .
GOGO:0006419; P:alanyl-tRNA aminoacylation; IDA:RGD; .
InterProIPR002318; Ala-tRNA-synth_IIc; .
InterProIPR018162; Ala-tRNA-synth_IIc_anticod-bd; .
InterProIPR018165; Ala-tRNA-synth_IIc_core; .
InterProIPR018164; Ala-tRNA-synth_IIc_N; .
InterProIPR023033; Ala_tRNA_synth_euk/bac; .
InterProIPR003156; Pesterase_DHHA1; .
InterProIPR018163; Thr/Ala-tRNA-synth_IIc_edit; .
InterProIPR012947; tRNA_SAD; .
KOK01872; -; .
PfamPF02272; DHHA1; 1; .
PfamPF01411; tRNA-synt_2c; 1; .
PfamPF07973; tRNA_SAD; 1; .
SMARTSM00863; tRNA_SAD; 1; .
SUPFAMSSF101353; Ala-tRNA-synth_IIc_anticod-bd; 1; .
SUPFAMSSF55186; Thr/Ala-tRNA-synth_IIc_edit; 1; .
TIGRFAMsTIGR00344; AlaS; 1; .

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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server