Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

OB21DSUB

MAP LOCATIONS:

SPOT 600:

pI=5.96; Mw=29000

MAPPING (identification):

SPOT 600: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

View entry in simple text format

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	ERP29_RAT
Primary accession number	P52555
Secondary accession number(s)	P80749 Q5BKC2
Sequence was last modified on	November 1, 1997 (version 2)
Annotations were last modified on	December 14, 2011 (version 110)
Name and origin of the protein
Description	RecName: Full=Endoplasmic reticulum resident protein 29; Short=ERp29; AltName: Full=Endoplasmic reticulum resident protein 31; Short=ERp31; Flags: Precursor;
Gene name	Name=Erp29
Encoded on	Name=Erp29
Keywords	3D-structure; Complete proteome; Direct protein sequencing; Endoplasmic reticulum; Phosphoprotein; Reference proteome; Signal; Stress response.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U36482; AAC15239.1; -; mRNA
EMBL	Y10264; CAA71313.1; -; mRNA
EMBL	AY004254; AAF93170.1; -; Genomic_DNA
EMBL	BC091129; AAH91129.1; -; mRNA
IPI	IPI00207184; -; .
RefSeq	NP_446413.1; NM_053961.2; .
UniGene	Rn.32904; -; .
PDB	1G7D; NMR; -; A=155-260
PDB	1G7E; NMR; -; A=33-154
PDBsum	1G7D; -; .
PDBsum	1G7E; -; .
ProteinModelPortal	P52555; -; .
SMR	P52555; 33-260; .
IntAct	P52555; 1; .
STRING	P52555; -; .
PhosphoSite	P52555; -; .
World-2DPAGE	0004:P52555; -; .
PRIDE	P52555; -; .
GeneID	117030; -; .
KEGG	rno:117030; -; .
UCSC	NM_053961; rat; .
CTD	10961; -; .
RGD	619781; Erp29; .
eggNOG	roNOG17758; -; .
GeneTree	ENSGT00390000018566; -; .
HOVERGEN	HBG051508; -; .
InParanoid	P52555; -; .
OMA	KIMGKVL; -; .
OrthoDB	EOG45QHF1; -; .
NextBio	619813; -; .
ArrayExpress	P52555; -; .
Genevestigator	P52555; -; .
GermOnline	ENSRNOG00000001348; Rattus norvegicus; .
GO	GO:0005788; C:endoplasmic reticulum lumen; TAS:RGD; .
GO	GO:0042470; C:melanosome; IEA:UniProtKB-SubCell; .
GO	GO:0030133; C:transport vesicle; IDA:RGD; .
GO	GO:0005515; F:protein binding; IPI:RGD; .
GO	GO:0006886; P:intracellular protein transport; TAS:RGD; .
GO	GO:0006457; P:protein folding; TAS:RGD; .
GO	GO:0009306; P:protein secretion; IEA:InterPro; .
GO	GO:0006950; P:response to stress; IEA:UniProtKB-KW; .
InterPro	IPR016855; ER_p29; .
InterPro	IPR011679; ER_p29_C; .
InterPro	IPR012883; ERp29_N; .
InterPro	IPR012336; Thioredoxin-like_fold; .
Gene3D	G3DSA:1.20.1150.12; ERp29_C_type; 1; .
Gene3D	G3DSA:3.40.30.10; Thioredoxin_fold; 1; .
KO	K09586; -; .
Pfam	PF07749; ERp29; 1; .
Pfam	PF07912; ERp29_N; 1; .
PIRSF	PIRSF027352; ER_p29; 1; .
SUPFAM	SSF47933; ERP29_C; 1; .
SUPFAM	SSF52833; Thiordxn-like_fd; 1; .
PROSITE	PS00014; ER_TARGET; 1; .

Searching in 'World-2DPAGE Repository [0014]' for entry matching: P52555

World-2DPAGE Repository (0014): P52555

P52555

General information about the entry

Entry name

ERP29_RAT

Primary accession number

P52555

integrated into World-2DPAGE Repository (0014) on

October 13, 2008 (release 1)

2D Annotations were last modified on

June 1, 2011 (version 3)

General Annotations were last modified on

November 25, 2011 (version 2)

Name and origin of the protein

Description

RecName: Full=Endoplasmic reticulum resident protein 29; Short=ERp29; AltName: Full=Endoplasmic reticulum resident protein 31; Short=ERp31; Flags: Precursor;.

Gene name

Name=Erp29

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.200900680; Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of whole cerebellum of the mature rat'' Proteomics 10(23):4311-4319 (2010)

2D PAGE maps for identified proteins

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum

RAT_CEREBELLUM_21D

MAP LOCATIONS:

SPOT 3135:

pI=6.23; Mw=28000

IDENTIFICATION: SPOT 3135: SeqCov=43%. MascotPMF=101 [1].
MAPPING (identification):

SPOT 3135: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

PRIDE

10017.

UniProtKB/Swiss-Prot

View entry in simple text format

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry name	ERP29_RAT
Primary accession number	P52555
Secondary accession number(s)	P80749 Q5BKC2
Sequence was last modified on	November 1, 1997 (version 2)
Annotations were last modified on	November 16, 2011 (version 109)
Name and origin of the protein
Description	RecName: Full=Endoplasmic reticulum resident protein 29; Short=ERp29; AltName: Full=Endoplasmic reticulum resident protein 31; Short=ERp31; Flags: Precursor;
Gene name	Name=Erp29
Encoded on	Name=Erp29
Keywords	3D-structure; Complete proteome; Direct protein sequencing; Endoplasmic reticulum; Phosphoprotein; Reference proteome; Signal; Stress response.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U36482; AAC15239.1; -; mRNA
EMBL	Y10264; CAA71313.1; -; mRNA
EMBL	AY004254; AAF93170.1; -; Genomic_DNA
EMBL	BC091129; AAH91129.1; -; mRNA
IPI	IPI00207184; -; .
RefSeq	NP_446413.1; NM_053961.2; .
UniGene	Rn.32904; -; .
PDB	1G7D; NMR; -; A=155-260
PDB	1G7E; NMR; -; A=33-154
PDBsum	1G7D; -; .
PDBsum	1G7E; -; .
ProteinModelPortal	P52555; -; .
SMR	P52555; 33-260; .
IntAct	P52555; 1; .
STRING	P52555; -; .
PhosphoSite	P52555; -; .
World-2DPAGE	0004:P52555; -; .
PRIDE	P52555; -; .
GeneID	117030; -; .
KEGG	rno:117030; -; .
UCSC	NM_053961; rat; .
CTD	10961; -; .
RGD	619781; Erp29; .
eggNOG	roNOG17758; -; .
GeneTree	ENSGT00390000018566; -; .
HOVERGEN	HBG051508; -; .
InParanoid	P52555; -; .
OMA	KIMGKVL; -; .
OrthoDB	EOG45QHF1; -; .
PhylomeDB	P52555; -; .
NextBio	619813; -; .
ArrayExpress	P52555; -; .
Genevestigator	P52555; -; .
GermOnline	ENSRNOG00000001348; Rattus norvegicus; .
GO	GO:0005788; C:endoplasmic reticulum lumen; TAS:RGD; .
GO	GO:0042470; C:melanosome; IEA:UniProtKB-SubCell; .
GO	GO:0030133; C:transport vesicle; IDA:RGD; .
GO	GO:0005515; F:protein binding; IPI:RGD; .
GO	GO:0006886; P:intracellular protein transport; TAS:RGD; .
GO	GO:0006457; P:protein folding; TAS:RGD; .
GO	GO:0009306; P:protein secretion; IEA:InterPro; .
GO	GO:0006950; P:response to stress; IEA:UniProtKB-KW; .
InterPro	IPR016855; ER_p29; .
InterPro	IPR011679; ER_p29_C; .
InterPro	IPR012883; ERp29_N; .
InterPro	IPR012336; Thioredoxin-like_fold; .
Gene3D	G3DSA:1.20.1150.12; ERp29_C_type; 1; .
Gene3D	G3DSA:3.40.30.10; Thioredoxin_fold; 1; .
KO	K09586; -; .
Pfam	PF07749; ERp29; 1; .
Pfam	PF07912; ERp29_N; 1; .
PIRSF	PIRSF027352; ER_p29; 1; .
SUPFAM	SSF47933; ERP29_C; 1; .
SUPFAM	SSF52833; Thiordxn-like_fd; 1; .
PROSITE	PS00014; ER_TARGET; 1; .

Searching in 'World-2DPAGE Repository [0019]' for entry matching: P52555

World-2DPAGE Repository (0019): P52555

P52555

General information about the entry

Entry name

ERP29_RAT

Primary accession number

P52555

integrated into World-2DPAGE Repository (0019) on

December 9, 2009 (release 1)

2D Annotations were last modified on

May 30, 2011 (version 2)

General Annotations were last modified on

January 13, 2012 (version 2)

Name and origin of the protein

Description

RecName: Full=Endoplasmic reticulum resident protein 29; Short=ERp29; AltName: Full=Endoplasmic reticulum resident protein 31; Short=ERp31; Flags: Precursor;.

Gene name

Name=Erp29

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	2D-PAGE GEL CHARACTERIZATION DOI=10.1111/j.1471-4159.2010.06719.x; VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M. ''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome'' J of Neurochemistry 113(6):1577-1588 (2010)

2D PAGE maps for identified proteins

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus

HIPP_SYNAP

MAP LOCATIONS:

SPOT 731:

pI=8.35; Mw=11819

IDENTIFICATION: SPOT 731: Peptides number=3. SeqCov=9.2%. MOWSE score=3.33E+2 [1].
MAPPING (identification):

SPOT 731: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Willard Freeman, Penn State College of Medicine, USA

Cross-references

UniProtKB/Swiss-Prot

View entry in simple text format

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	ERP29_RAT
Primary accession number	P52555
Secondary accession number(s)	P80749 Q5BKC2
Sequence was last modified on	November 1, 1997 (version 2)
Annotations were last modified on	December 14, 2011 (version 110)
Name and origin of the protein
Description	RecName: Full=Endoplasmic reticulum resident protein 29; Short=ERp29; AltName: Full=Endoplasmic reticulum resident protein 31; Short=ERp31; Flags: Precursor;
Gene name	Name=Erp29
Encoded on	Name=Erp29
Keywords	3D-structure; Complete proteome; Direct protein sequencing; Endoplasmic reticulum; Phosphoprotein; Reference proteome; Signal; Stress response.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U36482; AAC15239.1; -; mRNA
EMBL	Y10264; CAA71313.1; -; mRNA
EMBL	AY004254; AAF93170.1; -; Genomic_DNA
EMBL	BC091129; AAH91129.1; -; mRNA
IPI	IPI00207184; -; .
RefSeq	NP_446413.1; NM_053961.2; .
UniGene	Rn.32904; -; .
PDB	1G7D; NMR; -; A=155-260
PDB	1G7E; NMR; -; A=33-154
PDBsum	1G7D; -; .
PDBsum	1G7E; -; .
ProteinModelPortal	P52555; -; .
SMR	P52555; 33-260; .
IntAct	P52555; 1; .
STRING	P52555; -; .
PhosphoSite	P52555; -; .
World-2DPAGE	0004:P52555; -; .
PRIDE	P52555; -; .
GeneID	117030; -; .
KEGG	rno:117030; -; .
UCSC	NM_053961; rat; .
CTD	10961; -; .
RGD	619781; Erp29; .
eggNOG	roNOG17758; -; .
GeneTree	ENSGT00390000018566; -; .
HOVERGEN	HBG051508; -; .
InParanoid	P52555; -; .
OMA	KIMGKVL; -; .
OrthoDB	EOG45QHF1; -; .
NextBio	619813; -; .
ArrayExpress	P52555; -; .
Genevestigator	P52555; -; .
GermOnline	ENSRNOG00000001348; Rattus norvegicus; .
GO	GO:0005788; C:endoplasmic reticulum lumen; TAS:RGD; .
GO	GO:0042470; C:melanosome; IEA:UniProtKB-SubCell; .
GO	GO:0030133; C:transport vesicle; IDA:RGD; .
GO	GO:0005515; F:protein binding; IPI:RGD; .
GO	GO:0006886; P:intracellular protein transport; TAS:RGD; .
GO	GO:0006457; P:protein folding; TAS:RGD; .
GO	GO:0009306; P:protein secretion; IEA:InterPro; .
GO	GO:0006950; P:response to stress; IEA:UniProtKB-KW; .
InterPro	IPR016855; ER_p29; .
InterPro	IPR011679; ER_p29_C; .
InterPro	IPR012883; ERp29_N; .
InterPro	IPR012336; Thioredoxin-like_fold; .
Gene3D	G3DSA:1.20.1150.12; ERp29_C_type; 1; .
Gene3D	G3DSA:3.40.30.10; Thioredoxin_fold; 1; .
KO	K09586; -; .
Pfam	PF07749; ERp29; 1; .
Pfam	PF07912; ERp29_N; 1; .
PIRSF	PIRSF027352; ER_p29; 1; .
SUPFAM	SSF47933; ERP29_C; 1; .
SUPFAM	SSF52833; Thiordxn-like_fd; 1; .
PROSITE	PS00014; ER_TARGET; 1; .

Searching in 'World-2DPAGE Repository [0030]' for entry matching: P52555

World-2DPAGE Repository (0030): P52555

P52555

General information about the entry

Entry name

ERP29_RAT

Primary accession number

P52555

integrated into World-2DPAGE Repository (0030) on

November 9, 2010 (release 1)

2D Annotations were last modified on

June 21, 2011 (version 2)

General Annotations were last modified on

November 23, 2011 (version 2)

Name and origin of the protein

Description

RecName: Full=Endoplasmic reticulum resident protein 29; Short=ERp29; AltName: Full=Endoplasmic reticulum resident protein 31; Short=ERp31; Flags: Precursor;.

Gene name

Name=Erp29

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011)

2D PAGE maps for identified proteins

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)

RAT_INS1E_4-7

MAP LOCATIONS:

SPOT 2079:

pI=6.33; Mw=29742

SPOT 2094:

pI=6.19; Mw=29091

SPOT 2098:

pI=6.11; Mw=28930

IDENTIFICATION: SPOT 2079: Mascot protein score=109. Number of peptides=3 [1]
SPOT 2094: Mascot protein score=303. Number of peptides=5 [1]; SPOT 2098: Mascot protein score=149. Number of peptides=5 [1].
MAPPING (identification):

SPOT 2079: Tandem mass spectrometry [1];
SPOT 2094: Tandem mass spectrometry [1];
SPOT 2098: Tandem mass spectrometry [1].

Copyright

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium

Cross-references

UniProtKB/Swiss-Prot

World-2DPAGE Repository