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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
P61765
World-2DPAGE Repository
(0004):
P61765
P61765
General information about the entry
View entry in simple text format
Entry name
STXB1_RAT
Primary accession number
P61765
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Syntaxin-binding protein 1; AltName: Full=N-Sec1; AltName: Full=Protein unc-18 homolog 1; Short=Unc18-1; AltName: Full=Protein unc-18 homolog A; Short=Unc-18A; AltName: Full=p67; AltName: Full=rbSec1;.
Gene name
Name=Stxbp1
Synonyms=Unc18a
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 240
:
pI=6.62; Mw=63000
[identification data]
MAPPING (identification):
SPOT
240
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
P61765; STXB1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
STXB1_RAT
Primary accession number
P61765
Secondary accession number(s)
Q28208 Q62759 Q64320 Q96TG8
Sequence was last modified on
June 7, 2004 (version 1)
Annotations were last modified on
November 16, 2011 (version 80)
Name and origin of the protein
Description
RecName: Full=Syntaxin-binding protein 1; AltName: Full=N-Sec1; AltName: Full=Protein unc-18 homolog 1; Short=Unc18-1; AltName: Full=Protein unc-18 homolog A; Short=Unc-18A; AltName: Full=p67; AltName: Full=rbSec1;
Gene name
Name=Stxbp1
Synonyms=Unc18a
Encoded on
Name=Stxbp1; Synonyms=Unc18a
Keywords
3D-structure
;
Alternative splicing
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Membrane
;
Phosphoprotein
;
Protein transport
;
Reference proteome
;
Transport
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
L26087; AAB41113.1
; -; mRNA
EMBL
L26264; AAA19246.1
; -; mRNA
EMBL
U06069; AAA17987.1
; -; mRNA
EMBL
U21116; AAA96350.1
; -; mRNA
EMBL
BC088850; AAH88850.1
; -; mRNA
IPI
IPI00205372; -
; .
IPI
IPI00230938; -
; .
PIR
A53455; A53455
; .
PIR
S39345; S39345
; .
RefSeq
NP_037170.1; NM_013038.3
; .
UniGene
Rn.80843; -
; .
PDB
3C98; X-ray
; 2.60 A; A=1-594
PDB
3PUJ; X-ray
; 3.31 A; A/B=1-594
PDBsum
3C98; -
; .
PDBsum
3PUJ; -
; .
ProteinModelPortal
P61765; -
; .
SMR
P61765; 4-592
; .
DIP
DIP-766N; -
; .
IntAct
P61765; 6
; .
STRING
P61765; -
; .
PhosphoSite
P61765; -
; .
World-2DPAGE
0004:P61765; -
; .
PRIDE
P61765; -
; .
Ensembl
ENSRNOT00000021178; ENSRNOP00000021178
; ENSRNOG00000015420; .
Ensembl
ENSRNOT00000021189; ENSRNOP00000021189
; ENSRNOG00000015420; .
GeneID
25558; -
; .
KEGG
rno:25558; -
; .
UCSC
NM_013038; rat
; .
CTD
6812; -
; .
RGD
3785; Stxbp1
; .
eggNOG
maNOG05047; -
; .
GeneTree
ENSGT00390000005206; -
; .
HOVERGEN
HBG052710; -
; .
OMA
TEVCPEE; -
; .
OrthoDB
EOG4K6G3W; -
; .
PhylomeDB
P61765; -
; .
NextBio
607135; -
; .
ArrayExpress
P61765; -
; .
Genevestigator
P61765; -
; .
GermOnline
ENSRNOG00000015420; Rattus norvegicus
; .
GO
GO:0005829; C:cytosol
; TAS:RGD; .
GO
GO:0005886; C:plasma membrane
; IDA:RGD; .
GO
GO:0043234; C:protein complex
; IDA:RGD; .
GO
GO:0042802; F:identical protein binding
; IPI:BHF-UCL; .
GO
GO:0019904; F:protein domain specific binding
; IDA:RGD; .
GO
GO:0019901; F:protein kinase binding
; IPI:RGD; .
GO
GO:0047485; F:protein N-terminus binding
; IDA:RGD; .
GO
GO:0017075; F:syntaxin-1 binding
; IDA:MGI; .
GO
GO:0050821; P:protein stabilization
; IDA:MGI; .
GO
GO:0015031; P:protein transport
; IEA:UniProtKB-KW; .
GO
GO:0010807; P:regulation of synaptic vesicle priming
; IMP:RGD; .
GO
GO:0006904; P:vesicle docking involved in exocytosis
; IEA:InterPro; .
InterPro
IPR001619; Sec1-like
; .
KO
K15292; -
; .
PANTHER
PTHR11679; Sec1-like
; 1; .
Pfam
PF00995; Sec1
; 1; .
SUPFAM
SSF56815; Sec1-like
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server