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Searching in 'World-2DPAGE Repository [0004]' for entry matching: P62198




World-2DPAGE Repository (0004):  P62198


P62198


General information about the entry
View entry in simple text format
Entry namePRS8_RAT
Primary accession numberP62198
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=26S protease regulatory subunit 8; AltName: Full=26S proteasome AAA-ATPase subunit RPT6; AltName: Full=Proteasome 26S subunit ATPase 5; AltName: Full=Proteasome subunit p45; AltName: Full=Thyroid hormone receptor-interacting protein 1; Short=TRIP1; AltName: Full=p45/SUG;.
Gene nameName=Psmc5
Synonyms=Sug1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info
 
OB21DSUB

MAP LOCATIONS:
pI=7.00; Mw=50000  [identification data]

MAPPING (identification):
SPOT 389: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtP62198; PRS8_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry namePRS8_RAT
Primary accession numberP62198
Secondary accession number(s) O35051 P47210 P52915 P52916
Sequence was last modified on June 21, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 68)
Name and origin of the protein
DescriptionRecName: Full=26S protease regulatory subunit 8; AltName: Full=26S proteasome AAA-ATPase subunit RPT6; AltName: Full=Proteasome 26S subunit ATPase 5; AltName: Full=Proteasome subunit p45; AltName: Full=Thyroid hormone receptor-interacting protein 1; Short=TRIP1; AltName: Full=p45/SUG;
Gene nameName=Psmc5
Synonyms=Sug1
Encoded onName=Psmc5; Synonyms=Sug1
KeywordsAcetylation; ATP-binding; Complete proteome; Cytoplasm; Nucleotide-binding; Nucleus; Proteasome; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLD83521; BAA11938.1; -; mRNA
EMBLAB000491; BAA22933.1; -; mRNA
EMBLAB000493; BAA22935.1; -; Genomic_DNA
EMBLBC058462; AAH58462.1; -; mRNA
IPIIPI00213587; -; .
PIRT43799; T43799; .
RefSeqNP_112411.1; NM_031149.1; .
UniGeneRn.10972; -; .
ProteinModelPortalP62198; -; .
SMRP62198; 28-130; 138-397; .
IntActP62198; 3; .
STRINGP62198; -; .
PhosphoSiteP62198; -; .
World-2DPAGE0004:P62198; -; .
PRIDEP62198; -; .
EnsemblENSRNOT00000013997; ENSRNOP00000013997; ENSRNOG00000010038; .
GeneID81827; -; .
KEGGrno:81827; -; .
UCSCNM_031149; rat; .
CTD5705; -; .
RGD708376; Psmc5; .
GeneTreeENSGT00550000074947; -; .
HOVERGENHBG000109; -; .
InParanoidP62198; -; .
OMAPMDKKKV; -; .
OrthoDBEOG4MKNGF; -; .
PhylomeDBP62198; -; .
NextBio615767; -; .
ArrayExpressP62198; -; .
GenevestigatorP62198; -; .
GermOnlineENSRNOG00000010038; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; ISS:UniProtKB; .
GOGO:0005634; C:nucleus; ISS:UniProtKB; .
GOGO:0000502; C:proteasome complex; ISS:UniProtKB; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro; .
GOGO:0031531; F:thyrotropin-releasing hormone receptor binding; ISS:UniProtKB; .
GOGO:0008134; F:transcription factor binding; ISS:UniProtKB; .
GOGO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB; .
InterProIPR005937; 26S_Psome_P45; .
InterProIPR003593; ATPase_AAA+_core; .
InterProIPR003959; ATPase_AAA_core; .
InterProIPR003960; ATPase_AAA_CS; .
KOK03066; -; .
PfamPF00004; AAA; 1; .
SMARTSM00382; AAA; 1; .
TIGRFAMsTIGR01242; 26Sp45; 1; .
PROSITEPS00674; AAA; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server