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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
P69897
World-2DPAGE Repository
(0004):
P69897
P69897
General information about the entry
View entry in simple text format
Entry name
TBB5_RAT
Primary accession number
P69897
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Tubulin beta-5 chain;.
Gene name
Name=Tubb5
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 436
:
pI=5.11; Mw=45000
[identification data]
MAPPING (identification):
SPOT
436
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
P69897; TBB5_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
TBB5_RAT
Primary accession number
P69897
Secondary accession number(s)
P05218 Q6P9X8 Q8WUC1 Q9CY33
Sequence was last modified on
August 13, 1987 (version 1)
Annotations were last modified on
November 16, 2011 (version 67)
Name and origin of the protein
Description
RecName: Full=Tubulin beta-5 chain;
Gene name
Name=Tubb5
Encoded on
Name=Tubb5
Keywords
Acetylation
;
Alternative splicing
;
Complete proteome
;
Cytoplasm
;
Cytoskeleton
;
Direct protein sequencing
;
GTP-binding
;
Isopeptide bond
;
Methylation
;
Microtubule
;
Nucleotide-binding
;
Phosphoprotein
;
Reference proteome
;
S-nitrosylation
;
Ubl conjugation
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AB011679; BAA32736.1
; -; mRNA
EMBL
BX883048; CAE84031.1
; -; Genomic_DNA
EMBL
BC060540; AAH60540.1
; -; mRNA
IPI
IPI00197579; -
; .
IPI
IPI00829443; -
; .
PIR
A25113; A25113
; .
RefSeq
NP_775125.1; NM_173102.2
; .
UniGene
Rn.2458; -
; .
ProteinModelPortal
P69897; -
; .
SMR
P69897; 2-427
; .
IntAct
P69897; 1
; .
MINT
MINT-2513334; -
; .
STRING
P69897; -
; .
PhosphoSite
P69897; -
; .
World-2DPAGE
0004:P69897; -
; .
PRIDE
P69897; -
; .
Ensembl
ENSRNOT00000001095; ENSRNOP00000001095
; ENSRNOG00000000821; .
Ensembl
ENSRNOT00000068109; ENSRNOP00000060177
; ENSRNOG00000000821; .
GeneID
29214; -
; .
KEGG
rno:29214; -
; .
UCSC
NM_173102; rat
; .
CTD
22154; -
; .
RGD
628596; Tubb5
; .
eggNOG
roNOG14625; -
; .
HOVERGEN
HBG000089; -
; .
InParanoid
P69897; -
; .
OMA
RYQGEND; -
; .
PhylomeDB
P69897; -
; .
Reactome
REACT_115492; Developmental Biology
; .
NextBio
608393; -
; .
ArrayExpress
P69897; -
; .
Genevestigator
P69897; -
; .
GermOnline
ENSRNOG00000000821; Rattus norvegicus
; .
GO
GO:0005874; C:microtubule
; IEA:UniProtKB-KW; .
GO
GO:0005525; F:GTP binding
; IEA:UniProtKB-KW; .
GO
GO:0003924; F:GTPase activity
; IEA:InterPro; .
GO
GO:0032403; F:protein complex binding
; IDA:RGD; .
GO
GO:0007018; P:microtubule-based movement
; IEA:InterPro; .
GO
GO:0051258; P:protein polymerization
; IEA:InterPro; .
InterPro
IPR013838; Beta-tubulin_BS
; .
InterPro
IPR002453; Beta_tubulin
; .
InterPro
IPR008280; Tub_FtsZ_C
; .
InterPro
IPR000217; Tubulin
; .
InterPro
IPR018316; Tubulin/FtsZ_2-layer-sand-dom
; .
InterPro
IPR023123; Tubulin_C
; .
InterPro
IPR017975; Tubulin_CS
; .
InterPro
IPR003008; Tubulin_FtsZ_GTPase
; .
Gene3D
G3DSA:3.30.1330.20; Tubulin/FtsZ_2-layer-sand-dom
; 1; .
Gene3D
G3DSA:1.10.287.600; Tubulin_C
; 1; .
Gene3D
G3DSA:3.40.50.1440; Tubulin_FtsZ
; 1; .
KO
K07375; -
; .
PANTHER
PTHR11588; Tubulin
; 1; .
Pfam
PF00091; Tubulin
; 1; .
Pfam
PF03953; Tubulin_C
; 1; .
PRINTS
PR01163; BETATUBULIN
; .
PRINTS
PR01161; TUBULIN
; .
SMART
SM00864; Tubulin
; 1; .
SMART
SM00865; Tubulin_C
; 1; .
SUPFAM
SSF55307; Tub_FtsZ_C
; 1; .
SUPFAM
SSF52490; Tubulin_FtsZ
; 1; .
PROSITE
PS00227; TUBULIN
; 1; .
PROSITE
PS00228; TUBULIN_B_AUTOREG
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server