World-2DPAGE Repository

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

map experimental info

OB21DSUB

MAP LOCATIONS:

SPOT 231:

pI=5.39; Mw=67000

[identification data]

MAPPING (identification):

SPOT 231: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

P70615; LMNB1_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	LMNB1_RAT
Primary accession number	P70615
Sequence was last modified on	January 23, 2007 (version 3)
Annotations were last modified on	November 16, 2011 (version 91)
Name and origin of the protein
Description	RecName: Full=Lamin-B1; Flags: Precursor;
Gene name	Name=Lmnb1
Encoded on	Name=Lmnb1
Keywords	Acetylation; Coiled coil; Complete proteome; Direct protein sequencing; Intermediate filament; Lipoprotein; Membrane; Methylation; Nucleus; Phosphoprotein; Prenylation; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U72353; AAB09600.1; -; mRNA
IPI	IPI00231418; -; .
RefSeq	NP_446357.1; NM_053905.1; .
UniGene	Rn.11362; -; .
ProteinModelPortal	P70615; -; .
SMR	P70615; 30-65; 320-387; 435-545
STRING	P70615; -; .
PhosphoSite	P70615; -; .
World-2DPAGE	0004:P70615; -; .
PRIDE	P70615; -; .
GeneID	116685; -; .
KEGG	rno:116685; -; .
UCSC	NM_053905; rat; .
CTD	4001; -; .
RGD	620522; Lmnb1; .
eggNOG	roNOG07322; -; .
GeneTree	ENSGT00560000076873; -; .
HOVERGEN	HBG013015; -; .
InParanoid	P70615; -; .
OrthoDB	EOG45MN55; -; .
NextBio	619540; -; .
ArrayExpress	P70615; -; .
Genevestigator	P70615; -; .
GermOnline	ENSRNOG00000013774; Rattus norvegicus; .
GO	GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell; .
GO	GO:0016363; C:nuclear matrix; IDA:RGD; .
GO	GO:0005198; F:structural molecule activity; IEA:InterPro; .
InterPro	IPR016044; F; .
InterPro	IPR001664; IF; .
InterPro	IPR001322; IF_tail_C; .
InterPro	IPR018039; Intermediate_filament_CS; .
KO	K07611; -; .
PANTHER	PTHR23239; IF; 1; .
Pfam	PF00038; Filament; 1; .
Pfam	PF00932; IF_tail; 1; .
PROSITE	PS00226; IF; 1; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

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