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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
P80254
World-2DPAGE Repository
(0014):
P80254
P80254
General information about the entry
View entry in simple text format
Entry name
DOPD_RAT
Primary accession number
P80254
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=D-dopachrome decarboxylase; EC=4.1.1.84; AltName: Full=D-dopachrome tautomerase;.
Gene name
Name=Ddt
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3323
:
pI=6.38; Mw=10000
[identification data]
IDENTIFICATION:
SPOT 3323: SeqCov=87%. MascotPMF=122 [
1
].
MAPPING (identification):
SPOT
3323
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
P80254; DOPD_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
DOPD_RAT
Primary accession number
P80254
Sequence was last modified on
January 23, 2007 (version 3)
Annotations were last modified on
November 16, 2011 (version 83)
Name and origin of the protein
Description
RecName: Full=D-dopachrome decarboxylase; EC=4.1.1.84; AltName: Full=D-dopachrome tautomerase;
Gene name
Name=Ddt
Encoded on
Name=Ddt
Keywords
Acetylation
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Lyase
;
Melanin biosynthesis
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
Z36980; CAA85429.1
; -; mRNA
IPI
IPI00231963; -
; .
PIR
S68237; S68237
; .
RefSeq
NP_077045.1; NM_024131.1
; .
UniGene
Rn.3464; -
; .
ProteinModelPortal
P80254; -
; .
SMR
P80254; 2-118
; .
STRING
P80254; -
; .
PRIDE
P80254; -
; .
Ensembl
ENSRNOT00000001664; ENSRNOP00000001664
; ENSRNOG00000001239; .
GeneID
29318; -
; .
KEGG
rno:29318; -
; .
UCSC
NM_024131; rat
; .
CTD
1652; -
; .
RGD
61923; Ddt
; .
eggNOG
roNOG17526; -
; .
GeneTree
ENSGT00530000063544; -
; .
HOVERGEN
HBG003240; -
; .
InParanoid
P80254; -
; .
OMA
SMGKPRE; -
; .
OrthoDB
EOG46T330; -
; .
PhylomeDB
P80254; -
; .
BRENDA
4.1.1.84; 5301
; .
NextBio
608768; -
; .
ArrayExpress
P80254; -
; .
Genevestigator
P80254; -
; .
GermOnline
ENSRNOG00000001239; Rattus norvegicus
; .
GO
GO:0005737; C:cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0033981; F:D-dopachrome decarboxylase activity
; IEA:EC; .
GO
GO:0004167; F:dopachrome isomerase activity
; TAS:RGD; .
GO
GO:0006954; P:inflammatory response
; NAS:RGD; .
GO
GO:0042438; P:melanin biosynthetic process
; IEA:UniProtKB-KW; .
InterPro
IPR001398; Macrophage_inhib_fac
; .
InterPro
IPR019829; Macrophage_inhib_fac_CS
; .
InterPro
IPR014347; Tautomerase
; .
Gene3D
G3DSA:3.30.429.10; Tautomerase
; 1; .
KO
K10028; -
; .
PANTHER
PTHR11954; MIF
; 1; .
Pfam
PF01187; MIF
; 1; .
ProDom
PD004816; Macrophage_inhib_fac
; 1; .
SUPFAM
SSF55331; SSF55331
; 1; .
PROSITE
PS01158; MIF
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server