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Searching in 'World-2DPAGE Repository [0019]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0019):  PACN1_RAT


PACN1_RAT


General information about the entry
View entry in simple text format
Entry namePACN1_RAT
Primary accession numberQ9Z0W5
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Protein kinase C and casein kinase substrate in neurons protein 1; AltName: Full=Dynamin proline-rich domain-interacting protein; Short=Dynamin PRD-interacting protein; AltName: Full=Synaptic, dynamin-associated protein I; AltName: Full=Syndapin 1; AltName: Full=Syndapin-I; Short=SdpI;.
Gene nameName=Pacsin1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info
 
HIPP_SYNAP

MAP LOCATIONS:
pI=5.15; Mw=50759  [identification data]
pI=5.15; Mw=50759  [identification data]
pI=5.15; Mw=50759  [identification data]

IDENTIFICATION: SPOT 1011: Peptides number=7. SeqCov=17.7%. MOWSE score=3.81E+5 [1]
SPOT 1012: Peptides number=7. SeqCov=19.3%. MOWSE score=3.92E+6 [1]; SPOT 1158: Peptides number=5. SeqCov=15.9%. MOWSE score=1.40E+4 [1].
MAPPING (identification):
SPOT 1011: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 1012: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 1158: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/Swiss-ProtQ9Z0W5; PACN1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry namePACN1_RAT
Primary accession numberQ9Z0W5
Sequence was last modified on May 1, 1999 (version 1)
Annotations were last modified on September 21, 2011 (version 79)
Name and origin of the protein
DescriptionRecName: Full=Protein kinase C and casein kinase substrate in neurons protein 1; AltName: Full=Dynamin proline-rich domain-interacting protein; Short=Dynamin PRD-interacting protein; AltName: Full=Synaptic, dynamin-associated protein I; AltName: Full=Syndapin 1; AltName: Full=Syndapin-I; Short=SdpI;
Gene nameName=Pacsin1
Encoded onName=Pacsin1
KeywordsCoiled coil; Complete proteome; Cytoplasm; Direct protein sequencing; Endocytosis; Phosphoprotein; Reference proteome; SH3 domain.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF104402; AAD16887.1; -; mRNA
IPIIPI00208245; -; .
RefSeqNP_058990.1; NM_017294.1; .
UniGeneRn.161729; -; .
ProteinModelPortalQ9Z0W5; -; .
IntActQ9Z0W5; 2; .
MINTMINT-196270; -; .
STRINGQ9Z0W5; -; .
PhosphoSiteQ9Z0W5; -; .
PRIDEQ9Z0W5; -; .
GeneID29704; -; .
KEGGrno:29704; -; .
UCSCNM_017294; rat; .
CTD29993; -; .
RGD3247; Pacsin1; .
eggNOGroNOG11657; -; .
GeneTreeENSGT00510000046376; -; .
HOVERGENHBG053486; -; .
InParanoidQ9Z0W5; -; .
OrthoDBEOG4QVCC5; -; .
NextBio610115; -; .
ArrayExpressQ9Z0W5; -; .
GenevestigatorQ9Z0W5; -; .
GermOnlineENSRNOG00000025083; Rattus norvegicus; .
GOGO:0007010; P:cytoskeleton organization; IDA:RGD; .
GOGO:0006897; P:endocytosis; IEA:UniProtKB-KW; .
InterProIPR001060; FCH; .
InterProIPR001452; SH3_domain; .
PfamPF00611; FCH; 1; .
PfamPF00018; SH3_1; 1; .
PRINTSPR00452; SH3DOMAIN; .
SMARTSM00055; FCH; 1; .
SMARTSM00326; SH3; 1; .
SUPFAMSSF50044; SH3; 1; .
PROSITEPS50133; FCH; 1; .
PROSITEPS50002; SH3; 1; .





Searching in 'World-2DPAGE Repository [0001]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0001):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0001)



Searching in 'World-2DPAGE Repository [0002]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0002):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0002)



Searching in 'World-2DPAGE Repository [0003]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0003):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0003)



Searching in 'World-2DPAGE Repository [0004]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0004):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0004)



Searching in 'World-2DPAGE Repository [0005]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0005):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0005)



Searching in 'World-2DPAGE Repository [0006]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0006):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0006)



Searching in 'World-2DPAGE Repository [0007]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0007):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0007)



Searching in 'World-2DPAGE Repository [0008]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0008):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0008)



Searching in 'World-2DPAGE Repository [0009]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0009):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0009)



Searching in 'World-2DPAGE Repository [0010]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0010):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0010)



Searching in 'World-2DPAGE Repository [0011]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0011):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0011)



Searching in 'World-2DPAGE Repository [0012]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0012):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0012)



Searching in 'World-2DPAGE Repository [0014]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0014):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0014)



Searching in 'World-2DPAGE Repository [0017]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0017):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0017)



Searching in 'World-2DPAGE Repository [0018]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0018):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0018)



Searching in 'World-2DPAGE Repository [0020]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0020):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0020)



Searching in 'World-2DPAGE Repository [0021]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0021):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0021)



Searching in 'World-2DPAGE Repository [0022]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0022):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0022)



Searching in 'World-2DPAGE Repository [0023]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0023):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0023)



Searching in 'World-2DPAGE Repository [0024]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0024):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0024)



Searching in 'World-2DPAGE Repository [0026]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0026):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0026)



Searching in 'World-2DPAGE Repository [0027]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0027):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0027)



Searching in 'World-2DPAGE Repository [0029]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0029):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0029)



Searching in 'World-2DPAGE Repository [0030]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0030):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0030)



Searching in 'World-2DPAGE Repository [0031]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0031):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0031)



Searching in 'World-2DPAGE Repository [0032]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0032):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0032)



Searching in 'World-2DPAGE Repository [0034]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0034):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0034)



Searching in 'World-2DPAGE Repository [0035]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0035):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0035)



Searching in 'World-2DPAGE Repository [0036]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0036):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0036)



Searching in 'World-2DPAGE Repository [0037]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0037):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0037)



Searching in 'World-2DPAGE Repository [0038]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0038):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0038)



Searching in 'World-2DPAGE Repository [0039]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0039):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0039)



Searching in 'World-2DPAGE Repository [0040]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0040):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0040)



Searching in 'World-2DPAGE Repository [0042]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0042):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0042)



Searching in 'World-2DPAGE Repository [0043]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0043):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0043)



Searching in 'World-2DPAGE Repository [0044]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0044):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0044)



Searching in 'World-2DPAGE Repository [0046]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0046):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0046)



Searching in 'World-2DPAGE Repository [0047]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0047):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0047)



Searching in 'World-2DPAGE Repository [0050]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0050):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0050)



Searching in 'World-2DPAGE Repository [0051]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0051):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0051)



Searching in 'World-2DPAGE Repository [0053]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0053):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0053)



Searching in 'World-2DPAGE Repository [0054]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0054):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0054)



Searching in 'World-2DPAGE Repository [0056]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0056):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0056)



Searching in 'World-2DPAGE Repository [0059]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0059):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0059)



Searching in 'World-2DPAGE Repository [0061]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0061):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0061)



Searching in 'World-2DPAGE Repository [0062]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0062):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0062)



Searching in 'World-2DPAGE Repository [0063]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0063):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0063)



Searching in 'World-2DPAGE Repository [0066]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0066):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0066)



Searching in 'World-2DPAGE Repository [0068]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0068):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0068)



Searching in 'World-2DPAGE Repository [0069]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0069):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0069)



Searching in 'World-2DPAGE Repository [0076]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0076):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0076)



Searching in 'World-2DPAGE Repository [0077]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0077):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0077)



Searching in 'World-2DPAGE Repository [0080]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0080):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0080)



Searching in 'World-2DPAGE Repository [0084]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0084):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0084)



Searching in 'World-2DPAGE Repository [0085]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0085):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0085)



Searching in 'World-2DPAGE Repository [0088]' for entry matching: PACN1_RAT




World-2DPAGE Repository (0088):  PACN1_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0088)




World-2DPAGE Repository image

World-2DPAGE Repository (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server