World-2DPAGE Repository
Home
|
Contact
Due to scheduled maintenance work, this service will not be available from Tuesday August 23rd 06:00 pm until Wednesday August 24th 08:00 am
CEST
. Apologies for the inconvenience.
!!This displayer contains script commands. You should enable JavaScripting within your browser preferences, or use another browser!
World-2DPAGE Repository
Search by
[accession number]
[description, ID or gene]
[author names]
[spot ID / serial number]
[identification methods]
[pI / Mw range]
[combined fields]
Maps
[experimental info]
[protein list]
[graphical interface]
Databases
0001
0002
0003
0004
0005
0006
0007
0008
0009
0010
0011
0012
0014
0017
0018
0019
0020
0021
0022
0023
0024
0026
0027
0029
0030
0031
0032
0034
0035
0036
0037
0038
0039
0040
0042
0043
0044
0046
0047
0050
0051
0053
0054
0056
0059
0061
0062
0063
0066
0068
0069
0076
0077
0080
0084
0085
0088
use 'Ctrl' to select several
databases
Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
PBP_STAAU
World-2DPAGE Repository
(0022):
PBP_STAAU
PBP_STAAU
General information about the entry
View entry in simple text format
Entry name
PBP_STAAU
Primary accession number
P07944
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Beta-lactam-inducible penicillin-binding protein;.
Gene name
Name=pbp
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 178
:
pI=6.26; Mw=36230
[identification data]
IDENTIFICATION:
SPOT 178: SeqCov=33.5%. Peptides MS=12/20. Mascot PMF Score=106 [
1
].
PEPTIDE EVIDENCE:
SPOT 178: 307-HKDYPFHAEV-316 (78) / 156-AIGVSNFNPLQIER-169 (105) / 178-YKPAVNQIECHPYLTQEK-195 (47) [
1
].
MAPPING (identification):
SPOT
178
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
P07944; PBP_STAAU.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
PBP_STAAU
Primary accession number
P07944
Sequence was last modified on
August 1, 1988 (version 1)
Annotations were last modified on
April 5, 2011 (version 62)
Name and origin of the protein
Description
RecName: Full=Beta-lactam-inducible penicillin-binding protein;
Gene name
Name=pbp
Encoded on
Name=pbp
Keywords
Antibiotic resistance
;
Cell cycle
;
Cell division
;
Cell membrane
;
Cell shape
;
Cell wall biogenesis/degradation
;
Membrane
;
Peptidoglycan synthesis
;
Transmembrane
;
Transmembrane helix
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
Y00688; CAA68684.1
; -; Genomic_DNA
ProteinModelPortal
P07944; -
; .
SMR
P07944; 27-670
; .
GO
GO:0016021; C:integral to membrane
; IEA:UniProtKB-KW; .
GO
GO:0005886; C:plasma membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0008658; F:penicillin binding
; IEA:InterPro; .
GO
GO:0007049; P:cell cycle
; IEA:UniProtKB-KW; .
GO
GO:0051301; P:cell division
; IEA:UniProtKB-KW; .
GO
GO:0007047; P:cellular cell wall organization
; IEA:UniProtKB-KW; .
GO
GO:0009252; P:peptidoglycan biosynthetic process
; IEA:UniProtKB-KW; .
GO
GO:0008360; P:regulation of cell shape
; IEA:UniProtKB-KW; .
GO
GO:0046677; P:response to antibiotic
; IEA:UniProtKB-KW; .
InterPro
IPR012338; Beta-lactam/transpept-like
; .
InterPro
IPR007887; MecA_N
; .
InterPro
IPR005311; PBP_dimer
; .
InterPro
IPR001460; PCN-bd_Tpept
; .
Gene3D
G3DSA:3.40.710.10; G3DSA:3.40.710.10
; 1; .
Pfam
PF05223; MecA_N
; 1; .
Pfam
PF03717; PBP_dimer
; 1; .
Pfam
PF00905; Transpeptidase
; 1; .
SUPFAM
SSF56519; PBP_dimer
; 1; .
SUPFAM
SSF56601; PBP_transp_fold
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server