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Searching in 'World-2DPAGE Repository [0004]' for entry matching: PRPS1_RAT

World-2DPAGE Repository (0004):  PRPS1_RAT


General information about the entry
View entry in simple text format
Entry namePRPS1_RAT
Primary accession numberP60892
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Ribose-phosphate pyrophosphokinase 1; EC=; AltName: Full=Phosphoribosyl pyrophosphate synthase I; Short=PRS-I;.
Gene nameName=Prps1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
  map experimental info

pI=6.75; Mw=38000  [identification data]

MAPPING (identification):
SPOT 517: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP60892; PRPS1_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry namePRPS1_RAT
Primary accession numberP60892
Secondary accession number(s) P09329 Q5M8A4
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 73)
Name and origin of the protein
DescriptionRecName: Full=Ribose-phosphate pyrophosphokinase 1; EC=; AltName: Full=Phosphoribosyl pyrophosphate synthase I; Short=PRS-I;
Gene nameName=Prps1
Encoded onName=Prps1
KeywordsATP-binding; Complete proteome; Direct protein sequencing; Kinase; Magnesium; Metal-binding; Nucleotide biosynthesis; Nucleotide-binding; Reference proteome; Transferase.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLM17258; AAA41963.1; -; mRNA
EMBLM29392; AAA41960.1; -; mRNA
EMBLX16554; CAA34555.1; -; mRNA
EMBLM31084; AAA41959.1; -; Genomic_DNA
EMBLM31078; AAA41959.1; JOINED; Genomic_DNA
EMBLM31079; AAA41959.1; JOINED; Genomic_DNA
EMBLM31080; AAA41959.1; JOINED; Genomic_DNA
EMBLM31082; AAA41959.1; JOINED; Genomic_DNA
EMBLM31083; AAA41959.1; JOINED; Genomic_DNA
EMBLBC078853; AAH78853.1; -; mRNA
EMBLBC088149; AAH88149.1; -; mRNA
IPIIPI00365212; -; .
PIRA35465; KIRTR1; .
RefSeqNP_001009694.1; NM_001009694.1; .
RefSeqNP_058939.1; NM_017243.2; .
UniGeneRn.91470; -; .
UniGeneRn.9761; -; .
ProteinModelPortalP60892; -; .
SMRP60892; 3-317; .
IntActP60892; 1; .
STRINGP60892; -; .
PhosphoSiteP60892; -; .
World-2DPAGE0004:P60892; -; .
PRIDEP60892; -; .
EnsemblENSRNOT00000029571; ENSRNOP00000029405; ENSRNOG00000025166; .
EnsemblENSRNOT00000040360; ENSRNOP00000043734; ENSRNOG00000031938; .
GeneID29562; -; .
GeneID314140; -; .
KEGGrno:29562; -; .
KEGGrno:314140; -; .
UCSCNM_017243; rat; .
CTD5631; -; .
RGD61955; Prps1; .
eggNOGroNOG13921; -; .
GeneTreeENSGT00550000074583; -; .
HOVERGENHBG001520; -; .
InParanoidP60892; -; .
OrthoDBEOG4SQWX5; -; .
PhylomeDBP60892; -; .
NextBio609618; -; .
ArrayExpressP60892; -; .
GenevestigatorP60892; -; .
GermOnlineENSRNOG00000025166; Rattus norvegicus; .
GOGO:0002189; C:ribose phosphate diphosphokinase complex; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0043531; F:ADP binding; IDA:RGD; .
GOGO:0016208; F:AMP binding; IDA:RGD; .
GOGO:0005524; F:ATP binding; ISS:UniProtKB; .
GOGO:0019003; F:GDP binding; IDA:RGD; .
GOGO:0016301; F:kinase activity; IEA:UniProtKB-KW; .
GOGO:0000287; F:magnesium ion binding; IDA:RGD; .
GOGO:0042803; F:protein homodimerization activity; ISS:UniProtKB; .
GOGO:0004749; F:ribose phosphate diphosphokinase activity; ISS:UniProtKB; .
GOGO:0005529; F:sugar binding; IDA:RGD; .
GOGO:0006015; P:5-phosphoribose 1-diphosphate biosynthetic process; IDA:RGD; .
GOGO:0006167; P:AMP biosynthetic process; IDA:RGD; .
GOGO:0009116; P:nucleoside metabolic process; IEA:InterPro; .
GOGO:0031100; P:organ regeneration; IEP:RGD; .
InterProIPR000842; PRib_PP_synth_CS; .
InterProIPR000836; PRibTrfase; .
InterProIPR005946; Rib-P_diPkinase; .
KOK00948; -; .
PfamPF00156; Pribosyltran; 1; .
TIGRFAMsTIGR01251; RibP_PPkin; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server