Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.

World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0004]' for entry matching: PYGB_RAT World-2DPAGE Repository (0004):  PYGB_RAT PYGB_RAT General information about the entry View entry in simple text format Entry name PYGB_RAT Primary accession number P53534 integrated into World-2DPAGE Repository (0004) on  October 13, 2008 (release 1) 2D Annotations were last modified on May 18, 2011 (version 2) General Annotations were last modified on  December 22, 2011 (version 2) Name and origin of the protein Description RecName: Full=Glycogen phosphorylase, brain form; EC=2.4.1.1; Flags: Fragment;. Gene name Name=Pygb Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009) 2D PAGE maps for identified proteins How to interpret a protein OB21DSUB {2-DE gel for Olfactory bulb proteome} Rattus norvegicus (Rat) Tissue: Olfactory bulb   map experimental info   OB21DSUB MAP LOCATIONS: SPOT 138: pI=6.26; Mw=93000   [identification data] SPOT 786: pI=6.35; Mw=94000   [identification data] MAPPING (identification): SPOT 138: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 786: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India Cross-references UniProtKB/Swiss-Prot P53534; PYGB_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_12 Entry name PYGB_RAT Primary accession number P53534 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  November 16, 2011 (version 90) Name and origin of the protein Description RecName: Full=Glycogen phosphorylase, brain form; EC=2.4.1.1; Flags: Fragment; Gene name Name=Pygb Encoded on Name=Pygb Keywords Acetylation; Allosteric enzyme; Carbohydrate metabolism; Complete proteome; Direct protein sequencing; Glycogen metabolism; Glycosyltransferase; Phosphoprotein; Pyridoxal phosphate; Reference proteome; Transferase. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL L10668; AAA41252.1; -; mRNA EMBL M27726; AAA40815.1; -; mRNA IPI IPI00948869; -; . PIR S37300; S37300; . RefSeq NP_037320.1; NM_013188.1; . UniGene Rn.1518; -; . ProteinModelPortal P53534; -; . SMR P53534; 14-838; . IntAct P53534; 1; . STRING P53534; -; . CAZy GT35; Glycosyltransferase Family 35; . PhosphoSite P53534; -; . World-2DPAGE 0004:P53534; -; . PRIDE P53534; -; . GeneID 25739; -; . KEGG rno:25739; -; . CTD 5834; -; . RGD 3460; Pygb; . eggNOG roNOG12045; -; . GeneTree ENSGT00390000016886; -; . HOVERGEN HBG006848; -; . InParanoid P53534; -; . PhylomeDB P53534; -; . NextBio 607887; -; . ArrayExpress P53534; -; . Genevestigator P53534; -; . GermOnline ENSRNOG00000007583; Rattus norvegicus; . GO GO:0030424; C:axon; IDA:RGD; . GO GO:0005625; C:soluble fraction; IDA:RGD; . GO GO:0008144; F:drug binding; IDA:RGD; . GO GO:0008184; F:glycogen phosphorylase activity; IDA:RGD; . GO GO:0042803; F:protein homodimerization activity; IDA:RGD; . GO GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro; . GO GO:0005529; F:sugar binding; IDA:RGD; . GO GO:0005980; P:glycogen catabolic process; IDA:RGD; . InterPro IPR011833; Glycg_phsphrylas; . InterPro IPR000811; Glyco_trans_35; . KO K00688; -; . PANTHER PTHR11468; Glyco_trans_35; 1; . Pfam PF00343; Phosphorylase; 1; . PIRSF PIRSF000460; Pprylas_GlgP; 1; . TIGRFAMs TIGR02093; P_ylase; 1; . PROSITE PS00102; PHOSPHORYLASE; 1; . World-2DPAGE Repository (search AC)