World-2DPAGE Repository
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World-2DPAGE Repository
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Select Remote Interfaces
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SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
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Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
PYGB_RAT
World-2DPAGE Repository
(0004):
PYGB_RAT
PYGB_RAT
General information about the entry
View entry in simple text format
Entry name
PYGB_RAT
Primary accession number
P53534
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Glycogen phosphorylase, brain form; EC=2.4.1.1; Flags: Fragment;.
Gene name
Name=Pygb
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 138
:
pI=6.26; Mw=93000
[identification data]
SPOT 786
:
pI=6.35; Mw=94000
[identification data]
MAPPING (identification):
SPOT
138
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
786
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
P53534; PYGB_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
PYGB_RAT
Primary accession number
P53534
Sequence was last modified on
January 23, 2007 (version 3)
Annotations were last modified on
November 16, 2011 (version 90)
Name and origin of the protein
Description
RecName: Full=Glycogen phosphorylase, brain form; EC=2.4.1.1; Flags: Fragment;
Gene name
Name=Pygb
Encoded on
Name=Pygb
Keywords
Acetylation
;
Allosteric enzyme
;
Carbohydrate metabolism
;
Complete proteome
;
Direct protein sequencing
;
Glycogen metabolism
;
Glycosyltransferase
;
Phosphoprotein
;
Pyridoxal phosphate
;
Reference proteome
;
Transferase
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
L10668; AAA41252.1
; -; mRNA
EMBL
M27726; AAA40815.1
; -; mRNA
IPI
IPI00948869; -
; .
PIR
S37300; S37300
; .
RefSeq
NP_037320.1; NM_013188.1
; .
UniGene
Rn.1518; -
; .
ProteinModelPortal
P53534; -
; .
SMR
P53534; 14-838
; .
IntAct
P53534; 1
; .
STRING
P53534; -
; .
CAZy
GT35; Glycosyltransferase Family 35
; .
PhosphoSite
P53534; -
; .
World-2DPAGE
0004:P53534; -
; .
PRIDE
P53534; -
; .
GeneID
25739; -
; .
KEGG
rno:25739; -
; .
CTD
5834; -
; .
RGD
3460; Pygb
; .
eggNOG
roNOG12045; -
; .
GeneTree
ENSGT00390000016886; -
; .
HOVERGEN
HBG006848; -
; .
InParanoid
P53534; -
; .
PhylomeDB
P53534; -
; .
NextBio
607887; -
; .
ArrayExpress
P53534; -
; .
Genevestigator
P53534; -
; .
GermOnline
ENSRNOG00000007583; Rattus norvegicus
; .
GO
GO:0030424; C:axon
; IDA:RGD; .
GO
GO:0005625; C:soluble fraction
; IDA:RGD; .
GO
GO:0008144; F:drug binding
; IDA:RGD; .
GO
GO:0008184; F:glycogen phosphorylase activity
; IDA:RGD; .
GO
GO:0042803; F:protein homodimerization activity
; IDA:RGD; .
GO
GO:0030170; F:pyridoxal phosphate binding
; IEA:InterPro; .
GO
GO:0005529; F:sugar binding
; IDA:RGD; .
GO
GO:0005980; P:glycogen catabolic process
; IDA:RGD; .
InterPro
IPR011833; Glycg_phsphrylas
; .
InterPro
IPR000811; Glyco_trans_35
; .
KO
K00688; -
; .
PANTHER
PTHR11468; Glyco_trans_35
; 1; .
Pfam
PF00343; Phosphorylase
; 1; .
PIRSF
PIRSF000460; Pprylas_GlgP
; 1; .
TIGRFAMs
TIGR02093; P_ylase
; 1; .
PROSITE
PS00102; PHOSPHORYLASE
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server