resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.

World-2DPAGE Repository no longer accepts submissions.


World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Databases

use 'Ctrl' to select several
databases


Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0008]' for entry matching: Q3K722_PSEPF




World-2DPAGE Repository (0008):  Q3K722_PSEPF


Q3K722_PSEPF


General information about the entry
View entry in simple text format
Entry nameQ3K722_PSEPF
Primary accession numberQ3K722
integrated into World-2DPAGE Repository (0008) on February 5, 2009 (release 1)
2D Annotations were last modified onMay 27, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=NADP(H)-dependt aldo-keto reductase;.
Gene nameOrderedLocusNames=Pfl01_4695
Annotated speciesPseudomonas putida group [TaxID: 136845]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900142;
Cheng Z., Woody O.Z., Song J., Glick B.R., McConkey B.J.
''Proteome reference map for the plant growth-promotiong bacterium Pseudomonas putida UW4''
Proteomics 9(17):4271-4274 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

PSEPU_UW4 {Pseudomonas putida UW4 proteome reference map}
Pseudomonas putida group
PSEPU_UW4
  map experimental info
 
PSEPU_UW4

MAP LOCATIONS:
pI=6.56; Mw=39100  [identification data]

IDENTIFICATION COMMENT: SPOT 250: SeqCov=12.72%. Mascot Protein score=69.66 [1].
MAPPING (identification):
SPOT 250: Tandem mass spectrometry [1].

Copyright
Data from Dr. Zhenyu Cheng, University of Waterloo, Canada
Cross-references
UniProtKB/TrEMBLQ3K722; Q3K722_PSEPF.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ3K722_PSEPF
Primary accession numberQ3K722
Sequence was last modified on November 8, 2005 (version 1)
Annotations were last modified on October 19, 2011 (version 45)
Name and origin of the protein
DescriptionSubName: Full=NADP(H)-dependt aldo-keto reductase;
Gene nameOrderedLocusNames=Pfl01_4695
Encoded onOrderedLocusNames=Pfl01_4695
KeywordsComplete proteome.
Cross-references
EMBLCP000094; ABA76432.1; -; Genomic_DNA
RefSeqYP_350423.1; NC_007492.2; .
ProteinModelPortalQ3K722; -; .
SMRQ3K722; 1-346; .
STRINGQ3K722; -; .
World-2DPAGE0008:Q3K722; -; .
GeneID3714611; -; .
GenomeReviewsCP000094_GR; Pfl01_4695; .
KEGGpfo:Pfl01_4695; -; .
eggNOGCOG0667; -; .
HOGENOMHBG605727; -; .
OMAYATTERY; -; .
ProtClustDBCLSK868652; -; .
BioCycPFLU205922:PFL_4695-MONOMER; -; .
InterProIPR001395; Aldo/ket_red; .
InterProIPR023210; NADP_OxRdtase_dom; .
Gene3DG3DSA:3.20.20.100; Aldo/ket_red; 1; .
PANTHERPTHR11732; Aldo/ket_red; 1; .
PfamPF00248; Aldo_ket_red; 1; .
SUPFAMSSF51430; Aldo/ket_red; 1; .



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server