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Searching in 'World-2DPAGE Repository [0008]' for entry matching: Q4KHP9




World-2DPAGE Repository (0008):  Q4KHP9


Q4KHP9


General information about the entry
View entry in simple text format
Entry nameQ4KHP9_PSEF5
Primary accession numberQ4KHP9
integrated into World-2DPAGE Repository (0008) on February 5, 2009 (release 1)
2D Annotations were last modified onMay 27, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Homoserine dehydrogenase; EC=1.1.1.3;.
Gene nameName=hom
OrderedLocusNames=PFL_1103
Annotated speciesPseudomonas putida group [TaxID: 136845]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900142;
Cheng Z., Woody O.Z., Song J., Glick B.R., McConkey B.J.
''Proteome reference map for the plant growth-promotiong bacterium Pseudomonas putida UW4''
Proteomics 9(17):4271-4274 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

PSEPU_UW4 {Pseudomonas putida UW4 proteome reference map}
Pseudomonas putida group
PSEPU_UW4
  map experimental info
 
PSEPU_UW4

MAP LOCATIONS:
pI=5.80; Mw=50600  [identification data]

IDENTIFICATION COMMENT: SPOT 70: SeqCov=8.76%. Mascot Protein score=87.01 [1].
MAPPING (identification):
SPOT 70: Tandem mass spectrometry [1].

Copyright
Data from Dr. Zhenyu Cheng, University of Waterloo, Canada
Cross-references
UniProtKB/TrEMBLQ4KHP9; Q4KHP9_PSEF5.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ4KHP9_PSEF5
Primary accession numberQ4KHP9
Sequence was last modified on August 2, 2005 (version 1)
Annotations were last modified on November 16, 2011 (version 50)
Name and origin of the protein
DescriptionSubName: Full=Homoserine dehydrogenase; EC=1.1.1.3;
Gene nameName=hom
OrderedLocusNames=PFL_1103
Encoded onName=hom; OrderedLocusNames=PFL_1103
KeywordsComplete proteome; Oxidoreductase.
Cross-references
EMBLCP000076; AAY90390.1; -; Genomic_DNA
RefSeqYP_258234.1; NC_004129.6; .
ProteinModelPortalQ4KHP9; -; .
STRINGQ4KHP9; -; .
World-2DPAGE0008:Q4KHP9; -; .
GeneID3475708; -; .
GenomeReviewsCP000076_GR; PFL_1103; .
KEGGpfl:PFL_1103; -; .
NMPDRfig|220664.3.peg.2547; -; .
eggNOGCOG0460; -; .
HOGENOMHBG527379; -; .
OMAVHPAMIP; -; .
ProtClustDBPRK06349; -; .
BioCycPFLU220664:PFL_1103-MONOMER; -; .
GOGO:0016597; F:amino acid binding; IEA:InterPro; .
GOGO:0004412; F:homoserine dehydrogenase activity; IEA:EC; .
GOGO:0050661; F:NADP binding; IEA:InterPro; .
GOGO:0009097; P:isoleucine biosynthetic process; IEA:UniProtKB-KW; .
GOGO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW; .
GOGO:0009088; P:threonine biosynthetic process; IEA:UniProtKB-KW; .
InterProIPR002912; ACT-bd; .
InterProIPR005106; Asp/hSer_DH_NAD-bd; .
InterProIPR016204; HDH; .
InterProIPR001342; HDH_cat; .
InterProIPR019811; HDH_CS; .
InterProIPR016040; NAD(P)-bd_dom; .
Gene3DG3DSA:3.40.50.720; NAD(P)-bd; 1; .
KOK00003; -; .
PfamPF01842; ACT; 1; .
PfamPF00742; Homoserine_dh; 1; .
PfamPF03447; NAD_binding_3; 1; .
PIRSFPIRSF000098; Homoser_dehydrog; 1; .
PROSITEPS01042; HOMOSER_DHGENASE; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server