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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0030]' for entry
matching:
Q4KLI7
World-2DPAGE Repository
(0030):
Q4KLI7
Q4KLI7
General information about the entry
View entry in simple text format
Entry name
Q4KLI7_RAT
Primary accession number
Q4KLI7
integrated into World-2DPAGE Repository (0030) on
November 9, 2010 (release 1)
2D Annotations were last modified on
June 21, 2011 (version 2)
General Annotations were last modified on
November 23, 2011 (version 2)
Name and origin of the protein
Description
SubName: Full=Splicing factor 3a, subunit 3; SubName: Full=Uncharacterized protein;.
Gene name
Name=Sf3a3
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000006
;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_INS1E_4-7
{INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
map experimental info
RAT_INS1E_4-7
MAP LOCATIONS:
SPOT 849
:
pI=5.12; Mw=67553
[identification data]
IDENTIFICATION:
SPOT 849: Mascot protein score=75. Number of peptides=4 [
1
].
MAPPING (identification):
SPOT
849
:
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBL
Q4KLI7; Q4KLI7_RAT.
World-2DPAGE Repository
Q4KLI7; Q4KLI7_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/TrEMBL
Extracted from
UniProtKB/TrEMBL
, release:
2011_11
Entry name
Q4KLI7_RAT
Primary accession number
Q4KLI7
Sequence was last modified on
August 2, 2005 (version 1)
Annotations were last modified on
November 16, 2011 (version 46)
Name and origin of the protein
Description
SubName: Full=Splicing factor 3a, subunit 3; SubName: Full=Uncharacterized protein;
Gene name
Name=Sf3a3
Encoded on
Name=Sf3a3
Keywords
Complete proteome
;
Reference proteome
.
Cross-references
EMBL
BC099183; AAH99183.1
; -; mRNA
IPI
IPI00565197; -
; .
RefSeq
NP_001020869.1; NM_001025698.1
; .
UniGene
Rn.16732; -
; .
ProteinModelPortal
Q4KLI7; -
; .
SMR
Q4KLI7; 71-107
; .
STRING
Q4KLI7; -
; .
PRIDE
Q4KLI7; -
; .
Ensembl
ENSRNOT00000010373; ENSRNOP00000010373
; ENSRNOG00000007629; .
GeneID
313583; -
; .
KEGG
rno:313583; -
; .
UCSC
NM_001025698; rat
; .
CTD
10946; -
; .
eggNOG
roNOG15172; -
; .
GeneTree
ENSGT00530000063402; -
; .
HOVERGEN
HBG054452; -
; .
InParanoid
Q4KLI7; -
; .
OMA
KPLLDQN; -
; .
OrthoDB
EOG42FSHC; -
; .
PhylomeDB
Q4KLI7; -
; .
NextBio
666476; -
; .
ArrayExpress
Q4KLI7; -
; .
Genevestigator
Q4KLI7; -
; .
GO
GO:0003676; F:nucleic acid binding
; IEA:InterPro; .
GO
GO:0008270; F:zinc ion binding
; IEA:InterPro; .
InterPro
IPR024598; DUF3449
; .
InterPro
IPR021966; SF3a60_bindingd
; .
InterPro
IPR015880; Znf_C2H2-like
; .
InterPro
IPR000690; Znf_C2H2_matrin
; .
KO
K12827; -
; .
Pfam
PF11931; DUF3449
; 1; .
Pfam
PF12108; SF3a60_bindingd
; 1; .
SMART
SM00355; ZnF_C2H2
; 1; .
PROSITE
PS50171; ZF_MATRIN
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server