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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q4KM71_RAT World-2DPAGE Repository (0030):  Q4KM71_RAT Q4KM71_RAT General information about the entry View entry in simple text format Entry name Q4KM71_RAT Primary accession number Q4KM71 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description SubName: Full=Splicing factor proline/glutamine rich (Polypyrimidine tract binding protein associated);. Gene name Name=Sfpq Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 990: pI=6.72; Mw=63038   [identification data] IDENTIFICATION: SPOT 990: Mascot protein score=95. Number of peptides=3 [1]. MAPPING (identification): SPOT 990: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/TrEMBL Q4KM71; Q4KM71_RAT. World-2DPAGE Repository Q4KM71; Q4KM71_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/TrEMBL Extracted from UniProtKB/TrEMBL, release: 2011_11 Entry name Q4KM71_RAT Primary accession number Q4KM71 Sequence was last modified on  August 2, 2005 (version 1) Annotations were last modified on  November 16, 2011 (version 55) Name and origin of the protein Description SubName: Full=Splicing factor proline/glutamine rich (Polypyrimidine tract binding protein associated); Gene name Name=Sfpq Encoded on Name=Sfpq Keywords Name=Sfpq. Cross-references EMBL BC098731; AAH98731.1; -; mRNA IPI IPI00627068; -; . RefSeq NP_001020442.1; NM_001025271.1; . UniGene Rn.54645; -; . ProteinModelPortal Q4KM71; -; . SMR Q4KM71; 282-366; . STRING Q4KM71; -; . PhosphoSite Q4KM71; -; . PRIDE Q4KM71; -; . GeneID 252855; -; . KEGG rno:252855; -; . CTD 6421; -; . RGD 727923; Sfpq; . eggNOG roNOG07644; -; . GeneTree ENSGT00390000005004; -; . HOVERGEN HBG009801; -; . InParanoid Q4KM71; -; . OrthoDB EOG4RNB8S; -; . NextBio 623920; -; . ArrayExpress Q4KM71; -; . Genevestigator Q4KM71; -; . GO GO:0003676; F:nucleic acid binding; IEA:InterPro; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0005515; F:protein binding; IPI:BHF-UCL; . InterPro IPR012975; NOPS; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR000504; RRM_dom; . Gene3D G3DSA:3.30.70.330; a_b_plait_nuc_bd; 2; . KO K13219; -; . Pfam PF08075; NOPS; 1; . Pfam PF00076; RRM_1; 2; . SMART SM00360; RRM; 2; . PROSITE PS50102; RRM; 2; . World-2DPAGE Repository (search AC)