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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q4KMA2 World-2DPAGE Repository (0030):  Q4KMA2 Q4KMA2 General information about the entry View entry in simple text format Entry name RD23B_RAT Primary accession number Q4KMA2 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description RecName: Full=UV excision repair protein RAD23 homolog B;. Gene name Name=Rad23b Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 851: pI=4.62; Mw=67366   [identification data] IDENTIFICATION: SPOT 851: Mascot protein score=119. Number of peptides=5 [1]. MAPPING (identification): SPOT 851: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/Swiss-Prot Q4KMA2; RD23B_RAT. World-2DPAGE Repository Q4KMA2; RD23B_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name RD23B_RAT Primary accession number Q4KMA2 Secondary accession number(s) Q0D2G8 Q5CZZ8 Q6IRD5 Sequence was last modified on  August 2, 2005 (version 1) Annotations were last modified on  November 16, 2011 (version 55) Name and origin of the protein Description RecName: Full=UV excision repair protein RAD23 homolog B; Gene name Name=Rad23b Encoded on Name=Rad23b Keywords Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; DNA damage; DNA repair; Nucleus; Phosphoprotein; Proteasome; Reference proteome; Repeat; Ubl conjugation pathway. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL BC070960; AAH70960.1; -; mRNA EMBL BC090351; AAH90351.1; -; mRNA EMBL BC098674; AAH98674.1; -; mRNA EMBL BC111406; AAI11407.1; -; mRNA IPI IPI00210495; -; . RefSeq NP_001020446.1; NM_001025275.1; . UniGene Rn.67042; -; . HSSP P54728; 2F4M; . ProteinModelPortal Q4KMA2; -; . SMR Q4KMA2; 1-82; 184-231; 273-332 371-415 . IntAct Q4KMA2; 55; . STRING Q4KMA2; -; . PhosphoSite Q4KMA2; -; . PRIDE Q4KMA2; -; . Ensembl ENSRNOT00000021629; ENSRNOP00000021629; ENSRNOG00000016137; . GeneID 298012; -; . KEGG rno:298012; -; . NMPDR fig|10116.3.peg.23168; -; . UCSC NM_001025275; rat; . CTD 5887; -; . RGD 1562958; Rad23b; . eggNOG roNOG07444; -; . GeneTree ENSGT00390000012078; -; . HOVERGEN HBG055042; -; . InParanoid Q4KMA2; -; . OMA DATSALX; -; . OrthoDB EOG4M399F; -; . PhylomeDB Q4KMA2; -; . NextBio 642963; -; . ArrayExpress Q4KMA2; -; . Genevestigator Q4KMA2; -; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0000502; C:proteasome complex; IEA:UniProtKB-KW; . GO GO:0071942; C:XPC complex; ISS:UniProtKB; . GO GO:0003684; F:damaged DNA binding; IEA:InterPro; . GO GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro; . InterPro IPR004806; Rad23; . InterPro IPR006636; STI1_HS-bd; . InterPro IPR009060; UBA-like; . InterPro IPR000449; UBA/transl_elong_EF1B_N; . InterPro IPR015940; UBA/transl_elong_EF1B_N_euk; . InterPro IPR000626; Ubiquitin; . InterPro IPR019955; Ubiquitin_supergroup; . InterPro IPR015360; XPC-bd; . Gene3D G3DSA:1.10.10.540; XPC-bd; 1; . KO K10839; -; . Pfam PF00627; UBA; 2; . Pfam PF00240; ubiquitin; 1; . Pfam PF09280; XPC-binding; 1; . PRINTS PR01839; RAD23PROTEIN; . SMART SM00727; STI1; 1; . SMART SM00165; UBA; 2; . SMART SM00213; UBQ; 1; . SUPFAM SSF46934; UBA_like; 2; . SUPFAM SSF101238; XPC-bd; 1; . TIGRFAMs TIGR00601; Rad23; 1; . PROSITE PS50030; UBA; 2; . PROSITE PS00299; UBIQUITIN_1; FALSE_NEG; . PROSITE PS50053; UBIQUITIN_2; 1; . World-2DPAGE Repository (search AC)