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Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q5RKG9

World-2DPAGE Repository (0030):  Q5RKG9


General information about the entry
View entry in simple text format
Entry nameQ5RKG9_RAT
Primary accession numberQ5RKG9
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Eukaryotic translation initiation factor 4B; SubName: Full=Uncharacterized protein;.
Gene nameName=Eif4b
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=5.51; Mw=87014  [identification data]
pI=5.46; Mw=86773  [identification data]

IDENTIFICATION: SPOT 405: Mascot protein score=34. Number of peptides=1 [1]
SPOT 415: Mascot protein score=39. Number of peptides=3 [1].
MAPPING (identification):
SPOT 405: Tandem mass spectrometry [1];
SPOT 415: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
World-2DPAGE RepositoryQ5RKG9; Q5RKG9_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ5RKG9_RAT
Primary accession numberQ5RKG9
Sequence was last modified on December 21, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 62)
Name and origin of the protein
DescriptionSubName: Full=Eukaryotic translation initiation factor 4B; SubName: Full=Uncharacterized protein;
Gene nameName=Eif4b
Encoded onName=Eif4b; ORFNames=rCG_50632
KeywordsComplete proteome; Initiation factor; Protein biosynthesis; Reference proteome.
EMBLBC085933; AAH85933.1; -; mRNA
EMBLCH474035; EDL86866.1; -; Genomic_DNA
IPIIPI00373045; -; .
RefSeqNP_001008325.1; NM_001008324.1; .
UniGeneRn.95954; -; .
ProteinModelPortalQ5RKG9; -; .
SMRQ5RKG9; 89-178; .
PhosphoSiteQ5RKG9; -; .
EnsemblENSRNOT00000014033; ENSRNOP00000014033; ENSRNOG00000010103; .
GeneID300253; -; .
KEGGrno:300253; -; .
NMPDRfig|10116.3.peg.27830; -; .
UCSCNM_001008324; rat; .
CTD1975; -; .
RGD1306479; Eif4b; .
eggNOGroNOG07011; -; .
GeneTreeENSGT00530000063406; -; .
HOVERGENHBG006129; -; .
InParanoidQ5RKG9; -; .
OrthoDBEOG4SQWWX; -; .
PhylomeDBQ5RKG9; -; .
NextBio646645; -; .
ArrayExpressQ5RKG9; -; .
GenevestigatorQ5RKG9; -; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
Gene3DG3DSA:; a_b_plait_nuc_bd; 1; .
KOK03258; -; .
PfamPF00076; RRM_1; 1; .
SMARTSM00360; RRM; 1; .
PROSITEPS50102; RRM; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server