World-2DPAGE Repository

RecName: Full=Leucine-rich PPR motif-containing protein, mitochondrial; AltName: Full=130 kDa leucine-rich protein; Short=LRP 130; AltName: Full=Leucine rich protein 157; Short=rLRP157; Flags: Precursor;.

Gene name

Name=Lrpprc
Synonyms=Lrp157

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

map experimental info

OB21DSUB

MAP LOCATIONS:

SPOT 61:

pI=5.92; Mw=120000

[identification data]

SPOT 63:

pI=5.89; Mw=118000

[identification data]

MAPPING (identification):

SPOT 61: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 63: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

Q5SGE0; LPPRC_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	LPPRC_RAT
Primary accession number	Q5SGE0
Sequence was last modified on	December 21, 2004 (version 1)
Annotations were last modified on	September 21, 2011 (version 52)
Name and origin of the protein
Description	RecName: Full=Leucine-rich PPR motif-containing protein, mitochondrial; AltName: Full=130 kDa leucine-rich protein; Short=LRP 130; AltName: Full=Leucine rich protein 157; Short=rLRP157; Flags: Precursor;
Gene name	Name=Lrpprc Synonyms=Lrp157
Encoded on	Name=Lrpprc; Synonyms=Lrp157
Keywords	Acetylation; Complete proteome; DNA-binding; Membrane; Mitochondrion; mRNA transport; Nucleus; Reference proteome; Repeat; RNA-binding; Transcription; Transcription regulation; Transit peptide; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	AY293808; AAQ74626.1; -; mRNA
IPI	IPI00360075; -; .
RefSeq	NP_001008519.1; NM_001008519.1; .
UniGene	Rn.92051; -; .
ProteinModelPortal	Q5SGE0; -; .
STRING	Q5SGE0; -; .
PhosphoSite	Q5SGE0; -; .
World-2DPAGE	0004:Q5SGE0; -; .
PRIDE	Q5SGE0; -; .
GeneID	313867; -; .
KEGG	rno:313867; -; .
CTD	10128; -; .
RGD	1306575; Lrpprc; .
eggNOG	roNOG10313; -; .
GeneTree	ENSGT00390000016775; -; .
HOVERGEN	HBG097314; -; .
InParanoid	Q5SGE0; -; .
OrthoDB	EOG4DR9BG; -; .
NextBio	666938; -; .
ArrayExpress	Q5SGE0; -; .
Genevestigator	Q5SGE0; -; .
GO	GO:0000794; C:condensed nuclear chromosome; ISS:HGNC; .
GO	GO:0005856; C:cytoskeleton; ISS:HGNC; .
GO	GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell; .
GO	GO:0005640; C:nuclear outer membrane; IEA:UniProtKB-SubCell; .
GO	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell; .
GO	GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC; .
GO	GO:0048487; F:beta-tubulin binding; ISS:HGNC; .
GO	GO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
GO	GO:0051028; P:mRNA transport; IEA:UniProtKB-KW; .
GO	GO:0006355; P:regulation of transcription; DNA-dependent; IEA:UniProtKB-KW
GO	GO:0006351; P:transcription; DNA-dependent; IEA:UniProtKB-KW
InterPro	IPR002885; Pentatricopeptide_repeat; .
InterPro	IPR011990; TPR-like_helical; .
Gene3D	G3DSA:1.25.40.10; TPR-like_helical; 4; .
Pfam	PF01535; PPR; 6; .
TIGRFAMs	TIGR00756; PPR; 2; .
PROSITE	PS51375; PPR; 11; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

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