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Searching in 'World-2DPAGE Repository [0027]' for entry matching: Q60668

World-2DPAGE Repository (0027):  Q60668


General information about the entry
View entry in simple text format
Primary accession numberQ60668
integrated into World-2DPAGE Repository (0027) on September 30, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein D0; Short=hnRNP D0; AltName: Full=AU-rich element RNA-binding protein 1;.
Gene nameName=Hnrnpd
Synonyms=Auf1, Hnrpd
Annotated speciesMus musculus (Mouse) [TaxID: 10090]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
Blutke A., Block C., Berendt F., Herbach N., Kemter E., Amann K., Frolich T., Arnold G.J., Wanke R.
''Differential glomerular proteome analysis of two murine nephropathy models at onset of albuminuria''
Proteomics - Clinical Applications 5(6):375-381 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

GIPRDN_4-7 {glomerular protein lysates of a GIPRdn-tg animal}
Mus musculus (Mouse)
  map experimental info

pI=6.35; Mw=45000  [identification data]

IDENTIFICATION: SPOT 15: SeqCov=5%. Mascot protein score=32 [1].
MAPPING (identification):
SPOT 15: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Andreas Blutke, Institute of Veterinary Pathology, University Munich, Germany
UniProtKB/Swiss-ProtQ60668; HNRPD_MOUSE.
World-2DPAGE RepositoryQ60668; HNRPD_MOUSE.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Primary accession numberQ60668
Secondary accession number(s) Q60667 Q80ZJ0 Q91X94
Sequence was last modified on August 4, 2003 (version 2)
Annotations were last modified on November 16, 2011 (version 113)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein D0; Short=hnRNP D0; AltName: Full=AU-rich element RNA-binding protein 1;
Gene nameName=Hnrnpd
Synonyms=Auf1, Hnrpd
Encoded onName=Hnrnpd; Synonyms=Auf1, Hnrpd
KeywordsAcetylation; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; DNA-binding; Methylation; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Transcription; Transcription regulation.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLU11273; AAA64653.1; ALT_SEQ; mRNA
EMBLU11274; AAA64654.1; ALT_SEQ; mRNA
EMBLBC011172; AAH11172.2; -; mRNA
EMBLBC049098; AAH49098.1; -; mRNA
IPIIPI00230086; -; .
IPIIPI00330958; -; .
IPIIPI00336873; -; .
IPIIPI00336874; -; .
PIRI49069; I49069; .
PIRI49070; I49070; .
RefSeqNP_001070733.1; NM_001077265.1; .
RefSeqNP_001070734.1; NM_001077266.1; .
RefSeqNP_001070735.1; NM_001077267.1; .
RefSeqNP_031542.2; NM_007516.2; .
UniGeneMm.150231; -; .
ProteinModelPortalQ60668; -; .
SMRQ60668; 95-260; .
IntActQ60668; 4; .
STRINGQ60668; -; .
PhosphoSiteQ60668; -; .
PRIDEQ60668; -; .
EnsemblENSMUST00000019128; ENSMUSP00000019128; ENSMUSG00000000568; .
EnsemblENSMUST00000172361; ENSMUSP00000132735; ENSMUSG00000000568; .
GeneID11991; -; .
KEGGmmu:11991; -; .
UCSCuc008ygt.1; mouse; .
UCSCuc008ygu.1; mouse; .
CTD3184; -; .
MGIMGI:101947; Hnrnpd; .
GeneTreeENSGT00560000076532; -; .
HOGENOMHBG756718; -; .
HOVERGENHBG002295; -; .
InParanoidQ60668; -; .
OrthoDBEOG49W2FZ; -; .
PhylomeDBQ60668; -; .
NextBio280159; -; .
ArrayExpressQ60668; -; .
BgeeQ60668; -; .
GenevestigatorQ60668; -; .
GermOnlineENSMUSG00000000568; Mus musculus; .
GOGO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GOGO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0003723; F:RNA binding; ISS:UniProtKB; .
GOGO:0042162; F:telomeric DNA binding; ISS:UniProtKB; .
GOGO:0006355; P:regulation of transcription; DNA-dependent; IEA:UniProtKB-KW
GOGO:0006351; P:transcription; DNA-dependent; IEA:UniProtKB-KW
InterProIPR012956; CARG-binding_factor_N; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
Gene3DG3DSA:; a_b_plait_nuc_bd; 2; .
KOK13044; -; .
PfamPF08143; CBFNT; 1; .
PfamPF00076; RRM_1; 2; .
SMARTSM00360; RRM; 2; .
PROSITEPS50102; RRM; 2; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server