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Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q62651

World-2DPAGE Repository (0030):  Q62651


General information about the entry
View entry in simple text format
Entry nameECH1_RAT
Primary accession numberQ62651
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; EC=5.3.3.-; Flags: Precursor;.
Gene nameName=Ech1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=6.65; Mw=36550  [identification data]

IDENTIFICATION: SPOT 1821: Mascot protein score=240. Number of peptides=5 [1].
MAPPING (identification):
SPOT 1821: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
UniProtKB/Swiss-ProtQ62651; ECH1_RAT.
World-2DPAGE RepositoryQ62651; ECH1_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameECH1_RAT
Primary accession numberQ62651
Sequence was last modified on July 15, 1999 (version 2)
Annotations were last modified on November 16, 2011 (version 96)
Name and origin of the protein
DescriptionRecName: Full=Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; EC=5.3.3.-; Flags: Precursor;
Gene nameName=Ech1
Encoded onName=Ech1
Keywords3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Fatty acid metabolism; Isomerase; Lipid metabolism; Metal-binding; Mitochondrion; Peroxisome; Phosphoprotein; Reference proteome; Transit peptide; Zinc; Zinc-finger.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLU08976; AAA82008.1; -; mRNA
EMBLBC062226; AAH62226.1; -; mRNA
IPIIPI00326561; -; .
PIRA57626; A57626; .
RefSeqNP_072116.1; NM_022594.1; .
UniGeneRn.6148; -; .
PDB1DCI; X-ray; 1.50 A; A/B/C=54-327
PDBsum1DCI; -; .
ProteinModelPortalQ62651; -; .
SMRQ62651; 54-327; .
MINTMINT-4597589; -; .
STRINGQ62651; -; .
Rat-heart-2DPAGEQ62651; -; .
PRIDEQ62651; -; .
EnsemblENSRNOT00000027537; ENSRNOP00000027537; ENSRNOG00000020308; .
GeneID64526; -; .
KEGGrno:64526; -; .
UCSCBC060565; rat; .
CTD1891; -; .
RGD69353; Ech1; .
eggNOGroNOG16501; -; .
GeneTreeENSGT00580000081296; -; .
HOVERGENHBG005556; -; .
InParanoidQ62651; -; .
OrthoDBEOG4VQ9PW; -; .
PhylomeDBQ62651; -; .
NextBio613350; -; .
ArrayExpressQ62651; -; .
GenevestigatorQ62651; -; .
GermOnlineENSRNOG00000020308; Rattus norvegicus; .
GOGO:0005739; C:mitochondrion; IDA:UniProtKB; .
GOGO:0005777; C:peroxisome; IEA:UniProtKB-SubCell; .
GOGO:0016853; F:isomerase activity; IEA:UniProtKB-KW; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0006631; P:fatty acid metabolic process; IEA:UniProtKB-KW; .
InterProIPR001753; Crotonase_core; .
InterProIPR018376; Enoyl-CoA_hyd/isom_CS; .
KOK12663; -; .
PfamPF00378; ECH; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server