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World-2DPAGE Repository

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Searching in 'World-2DPAGE Repository [0014]' for entry matching: Q63198

World-2DPAGE Repository (0014):  Q63198


General information about the entry
View entry in simple text format
Entry nameCNTN1_RAT
Primary accession numberQ63198
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Contactin-1; AltName: Full=Neural cell surface protein F3; Flags: Precursor;.
Gene nameName=Cntn1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
  map experimental info

pI=5.69; Mw=111000  [identification data]

IDENTIFICATION: SPOT 2638: SeqCov=29%. MascotPMF=164 [1].
MAPPING (identification):
SPOT 2638: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtQ63198; CNTN1_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameCNTN1_RAT
Primary accession numberQ63198
Sequence was last modified on August 1, 1998 (version 2)
Annotations were last modified on November 16, 2011 (version 97)
Name and origin of the protein
DescriptionRecName: Full=Contactin-1; AltName: Full=Neural cell surface protein F3; Flags: Precursor;
Gene nameName=Cntn1
Encoded onName=Cntn1
KeywordsCell adhesion; Cell membrane; Complete proteome; Disulfide bond; Glycoprotein; GPI-anchor; Immunoglobulin domain; Lipoprotein; Membrane; Notch signaling pathway; Reference proteome; Repeat; Signal.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLD38492; BAA07504.1; -; mRNA
IPIIPI00206054; -; .
PIRA57112; A57112; .
RefSeqNP_476459.1; NM_057118.1; .
UniGeneRn.21397; -; .
ProteinModelPortalQ63198; -; .
SMRQ63198; 37-410; 793-905; .
STRINGQ63198; -; .
PRIDEQ63198; -; .
EnsemblENSRNOT00000006219; ENSRNOP00000006219; ENSRNOG00000004438; .
GeneID117258; -; .
KEGGrno:117258; -; .
UCSCNM_057118; rat; .
CTD1272; -; .
RGD621300; Cntn1; .
GeneTreeENSGT00550000074380; -; .
HOVERGENHBG051047; -; .
InParanoidQ63198; -; .
OrthoDBEOG4DZ1TH; -; .
PhylomeDBQ63198; -; .
NextBio620126; -; .
ArrayExpressQ63198; -; .
GenevestigatorQ63198; -; .
GermOnlineENSRNOG00000004438; Rattus norvegicus; .
GOGO:0031225; C:anchored to membrane; IEA:UniProtKB-KW; .
GOGO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell; .
GOGO:0007155; P:cell adhesion; IEA:UniProtKB-KW; .
GOGO:0007219; P:Notch signaling pathway; IEA:UniProtKB-KW; .
InterProIPR003961; Fibronectin_type3; .
InterProIPR007110; Ig-like; .
InterProIPR013783; Ig-like_fold; .
InterProIPR013098; Ig_I-set; .
InterProIPR003599; Ig_sub; .
InterProIPR003598; Ig_sub2; .
Gene3DG3DSA:; Ig-like_fold; 10; .
KOK06759; -; .
PfamPF00041; fn3; 3; .
PfamPF07679; I-set; 4; .
SMARTSM00060; FN3; 4; .
SMARTSM00409; IG; 2; .
SMARTSM00408; IGc2; 4; .
SUPFAMSSF49265; FN_III-like; 4; .
PROSITEPS50853; FN3; 4; .

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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server