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Searching in 'World-2DPAGE Repository [0004]' for entry matching: Q63537




World-2DPAGE Repository (0004):  Q63537

Q63537


General information about the entry
View entry in simple text format
Entry nameSYN2_RAT
Primary accession numberQ63537
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Synapsin-2; AltName: Full=Synapsin II;.
Gene nameName=Syn2
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info 		 
OB21DSUB

MAP LOCATIONS:
pI=6.78; Mw=54000  [identification data]

MAPPING (identification):
SPOT 783: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtQ63537; SYN2_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameSYN2_RAT
Primary accession numberQ63537
Secondary accession number(s) Q9Z1H0
Sequence was last modified on November 1, 1996 (version 1)
Annotations were last modified on September 21, 2011 (version 93)
Name and origin of the protein
DescriptionRecName: Full=Synapsin-2; AltName: Full=Synapsin II;
Gene nameName=Syn2
Encoded onName=Syn2
Keywords3D-structure; Alternative splicing; Cell junction; Complete proteome; Direct protein sequencing; Phosphoprotein; Reference proteome; Synapse.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM27925; AAA42100.1; -; mRNA
EMBLM27926; AAA42101.1; -; mRNA
IPIIPI00210036; -; .
IPIIPI00231408; -; .
PIRC30411; C30411; .
RefSeqNP_001029192.1; NM_001034020.1; .
RefSeqNP_062032.1; NM_019159.1; .
UniGeneRn.506; -; .
PDB1I7L; X-ray; 2.35 A; A/B=113-421
PDB1I7N; X-ray; 1.90 A; A/B=113-421
PDBsum1I7L; -; .
PDBsum1I7N; -; .
ProteinModelPortalQ63537; -; .
SMRQ63537; 113-421; .
IntActQ63537; 1; .
MINTMINT-233013; -; .
STRINGQ63537; -; .
PhosphoSiteQ63537; -; .
World-2DPAGE0004:Q63537; -; .
PRIDEQ63537; -; .
GeneID29179; -; .
KEGGrno:29179; -; .
UCSCNM_001034020; rat; .
CTD6854; -; .
RGD3798; Syn2; .
eggNOGroNOG09210; -; .
GeneTreeENSGT00530000063319; -; .
HOVERGENHBG016354; -; .
InParanoidQ63537; -; .
OrthoDBEOG4KPTB4; -; .
NextBio608259; -; .
PMAP-CutDBQ63537; -; .
ArrayExpressQ63537; -; .
GenevestigatorQ63537; -; .
GermOnlineENSRNOG00000008157; Rattus norvegicus; .
GOGO:0030054; C:cell junction; IEA:UniProtKB-KW; .
GOGO:0005524; F:ATP binding; IEA:InterPro; .
GOGO:0008092; F:cytoskeletal protein binding; TAS:RGD; .
GOGO:0016874; F:ligase activity; IEA:InterPro; .
GOGO:0046928; P:regulation of neurotransmitter secretion; TAS:RGD; .
InterProIPR013815; ATP_grasp_subdomain_1; .
InterProIPR013816; ATP_grasp_subdomain_2; .
InterProIPR013817; Pre-ATP_grasp; .
InterProIPR016185; PreATP-grasp-like; .
InterProIPR001359; Synapsin; .
InterProIPR020898; Synapsin_ATP-bd_dom; .
InterProIPR019735; Synapsin_CS; .
InterProIPR019736; Synapsin_P_site; .
InterProIPR020897; Synapsin_pre-ATP-grasp_dom; .
Gene3DG3DSA:3.30.1490.20; ATP_grasp_subdomain_1; 1; .
Gene3DG3DSA:3.30.470.20; ATP_grasp_subdomain_2; 2; .
Gene3DG3DSA:3.40.50.20; Pre-ATP_grasp; 1; .
PfamPF02078; Synapsin; 1; .
PfamPF02750; Synapsin_C; 1; .
PfamPF10581; Synapsin_N; 1; .
PRINTSPR01368; SYNAPSIN; .
SUPFAMSSF52440; PreATP-grasp-like; 1; .
PROSITEPS00415; SYNAPSIN_1; 1; .
PROSITEPS00416; SYNAPSIN_2; 1; .


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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server