World-2DPAGE Repository

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

map experimental info

OB21DSUB

MAP LOCATIONS:

SPOT 748:

pI=4.32; Mw=18000

[identification data]

MAPPING (identification):

SPOT 748: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

Q63754; SYUB_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	SYUB_RAT
Primary accession number	Q63754
Secondary accession number(s)	Q5PPN9
Sequence was last modified on	November 1, 1996 (version 1)
Annotations were last modified on	November 16, 2011 (version 77)
Name and origin of the protein
Description	RecName: Full=Beta-synuclein; AltName: Full=Phosphoneuroprotein 14; Short=PNP 14;
Gene name	Name=Sncb
Encoded on	Name=Sncb
Keywords	Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Reference proteome; Repeat.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	D17764; BAA04610.1; -; mRNA
EMBL	BC087579; AAH87579.1; -; mRNA
IPI	IPI00211864; -; .
RefSeq	NP_542955.2; NM_080777.2; .
UniGene	Rn.20352; -; .
ProteinModelPortal	Q63754; -; .
SMR	Q63754; 1-134; .
STRING	Q63754; -; .
PhosphoSite	Q63754; -; .
World-2DPAGE	0004:Q63754; -; .
PRIDE	Q63754; -; .
Ensembl	ENSRNOT00000024357; ENSRNOP00000024357; ENSRNOG00000018039; .
GeneID	113893; -; .
KEGG	rno:113893; -; .
UCSC	NM_080777; rat; .
CTD	6620; -; .
RGD	70992; Sncb; .
eggNOG	roNOG18011; -; .
GeneTree	ENSGT00390000016161; -; .
HOVERGEN	HBG000481; -; .
InParanoid	Q63754; -; .
OrthoDB	EOG40S0HC; -; .
NextBio	617964; -; .
ArrayExpress	Q63754; -; .
Genevestigator	Q63754; -; .
GermOnline	ENSRNOG00000018039; Rattus norvegicus; .
GO	GO:0043195; C:terminal button; IDA:RGD; .
InterPro	IPR001058; Synuclein; .
InterPro	IPR002461; Synuclein_beta; .
Gene3D	G3DSA:1.10.287.700; Synuclein; 1; .
PANTHER	PTHR13820; Synuclein; 1; .
PANTHER	PTHR13820:SF4; Synuclein_beta; 1; .
Pfam	PF01387; Synuclein; 1; .
PRINTS	PR01213; BSYNUCLEIN; .
PRINTS	PR01211; SYNUCLEIN; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

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