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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
Q64537
World-2DPAGE Repository
(0014):
Q64537
Q64537
General information about the entry
View entry in simple text format
Entry name
CPNS1_RAT
Primary accession number
Q64537
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Calpain small subunit 1; Short=CSS1; AltName: Full=Calcium-activated neutral proteinase small subunit; Short=CANP small subunit; AltName: Full=Calcium-dependent protease small subunit; Short=CDPS; AltName: Full=Calcium-dependent protease small subunit 1; AltName: Full=Calpain regulatory subunit;.
Gene name
Name=Capns1
Synonyms=Capn4, Css1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3132
:
pI=5.44; Mw=28000
[identification data]
IDENTIFICATION:
SPOT 3132: SeqCov=42%. MascotPMF=69 [
1
].
MAPPING (identification):
SPOT
3132
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
Q64537; CPNS1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
CPNS1_RAT
Primary accession number
Q64537
Secondary accession number(s)
P97572 Q4V795
Sequence was last modified on
December 6, 2005 (version 3)
Annotations were last modified on
November 16, 2011 (version 101)
Name and origin of the protein
Description
RecName: Full=Calpain small subunit 1; Short=CSS1; AltName: Full=Calcium-activated neutral proteinase small subunit; Short=CANP small subunit; AltName: Full=Calcium-dependent protease small subunit; Short=CDPS; AltName: Full=Calcium-dependent protease small subunit 1; AltName: Full=Calpain regulatory subunit;
Gene name
Name=Capns1
Synonyms=Capn4, Css1
Encoded on
Name=Capns1; Synonyms=Capn4, Css1
Keywords
3D-structure
;
Calcium
;
Cell membrane
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Membrane
;
Reference proteome
;
Repeat
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
BC098068; AAH98068.1
; -; mRNA
EMBL
U53859; AAC53002.1
; -; mRNA
EMBL
U10861; AAA64828.1
; -; mRNA
IPI
IPI00213536; -
; .
PIR
A55143; A55143
; .
RefSeq
NP_058814.1; NM_017118.1
; .
UniGene
Rn.3430; -
; .
PDB
1AJ5; X-ray
; 2.30 A; A/B=98-270
PDB
1DF0; X-ray
; 2.60 A; B=88-270
PDB
1DVI; X-ray
; 2.30 A; A/B=88-270
PDB
1NP8; X-ray
; 2.00 A; A/B=91-249
PDB
1U5I; X-ray
; 2.86 A; B=88-270
PDB
3BOW; X-ray
; 2.40 A; B=88-270
PDB
3DF0; X-ray
; 2.95 A; B=88-270
PDBsum
1AJ5; -
; .
PDBsum
1DF0; -
; .
PDBsum
1DVI; -
; .
PDBsum
1NP8; -
; .
PDBsum
1U5I; -
; .
PDBsum
3BOW; -
; .
PDBsum
3DF0; -
; .
ProteinModelPortal
Q64537; -
; .
SMR
Q64537; 95-270
; .
DIP
DIP-6140N; -
; .
IntAct
Q64537; 2
; .
MINT
MINT-112921; -
; .
STRING
Q64537; -
; .
PRIDE
Q64537; -
; .
GeneID
29156; -
; .
KEGG
rno:29156; -
; .
CTD
826; -
; .
RGD
2270; Capns1
; .
eggNOG
maNOG16189; -
; .
GeneTree
ENSGT00580000081418; -
; .
HOVERGEN
HBG004492; -
; .
InParanoid
Q64537; -
; .
OrthoDB
EOG4W6NWR; -
; .
PhylomeDB
Q64537; -
; .
NextBio
608179; -
; .
Genevestigator
Q64537; -
; .
GO
GO:0005737; C:cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0005886; C:plasma membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0005509; F:calcium ion binding
; TAS:RGD; .
GO
GO:0046982; F:protein heterodimerization activity
; IPI:RGD; .
GO
GO:0006508; P:proteolysis
; IMP:RGD; .
InterPro
IPR011992; EF-hand-like_dom
; .
InterPro
IPR018247; EF_Hand_1_Ca_BS
; .
InterPro
IPR018249; EF_HAND_2
; .
InterPro
IPR002048; EF_hand_Ca-bd
; .
Gene3D
G3DSA:1.10.238.10; EF-Hand_type
; 1; .
KO
K08583; -
; .
SMART
SM00054; EFh
; 3; .
PROSITE
PS00018; EF_HAND_1
; 2; .
PROSITE
PS50222; EF_HAND_2
; 3; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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, using the
Make2D-DB II
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ver. 3.10.2
) from the
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