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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
Q6MG61
World-2DPAGE Repository
(0014):
Q6MG61
Q6MG61
General information about the entry
View entry in simple text format
Entry name
CLIC1_RAT
Primary accession number
Q6MG61
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Chloride intracellular channel protein 1;.
Gene name
Name=Clic1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3105
:
pI=5.19; Mw=31000
[identification data]
IDENTIFICATION:
SPOT 3105: SeqCov=48%. MascotPMF=68 [
1
].
MAPPING (identification):
SPOT
3105
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
Q6MG61; CLIC1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
CLIC1_RAT
Primary accession number
Q6MG61
Sequence was last modified on
July 5, 2004 (version 1)
Annotations were last modified on
November 16, 2011 (version 70)
Name and origin of the protein
Description
RecName: Full=Chloride intracellular channel protein 1;
Gene name
Name=Clic1
Encoded on
Name=Clic1
Keywords
Acetylation
;
Cell membrane
;
Chloride
;
Chloride channel
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Disulfide bond
;
Ion transport
;
Ionic channel
;
Membrane
;
Nucleus
;
Phosphoprotein
;
Reference proteome
;
Transmembrane
;
Transmembrane helix
;
Transport
;
Voltage-gated channel
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
BX883045; CAE83985.1
; -; Genomic_DNA
EMBL
CH474121; EDL83493.1
; -; Genomic_DNA
EMBL
BC099823; AAH99823.1
; -; mRNA
IPI
IPI00421995; -
; .
RefSeq
NP_001002807.1; NM_001002807.2
; .
UniGene
Rn.203139; -
; .
HSSP
O00299; 1RK4
; .
ProteinModelPortal
Q6MG61; -
; .
SMR
Q6MG61; 6-241
; .
STRING
Q6MG61; -
; .
PRIDE
Q6MG61; -
; .
Ensembl
ENSRNOT00000042972; ENSRNOP00000045702
; ENSRNOG00000029682; .
GeneID
406864; -
; .
KEGG
rno:406864; -
; .
UCSC
NM_001002807; rat
; .
CTD
1192; -
; .
RGD
1303043; Clic1
; .
eggNOG
maNOG18297; -
; .
GeneTree
ENSGT00550000074477; -
; .
HOVERGEN
HBG050994; -
; .
InParanoid
Q6MG61; -
; .
OMA
REEFSST; -
; .
OrthoDB
EOG4FR0SC; -
; .
PhylomeDB
Q6MG61; -
; .
NextBio
696136; -
; .
ArrayExpress
Q6MG61; -
; .
Genevestigator
Q6MG61; -
; .
GO
GO:0034707; C:chloride channel complex
; IEA:UniProtKB-KW; .
GO
GO:0005737; C:cytoplasm
; ISS:UniProtKB; .
GO
GO:0005624; C:membrane fraction
; ISS:UniProtKB; .
GO
GO:0031965; C:nuclear membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0005886; C:plasma membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0005625; C:soluble fraction
; ISS:UniProtKB; .
GO
GO:0005247; F:voltage-gated chloride channel activity
; TAS:RGD; .
InterPro
IPR010987; Glutathione-S-Trfase_C-like
; .
InterPro
IPR017933; Glutathione_S_Trfase/Cl_chnl_C
; .
InterPro
IPR002946; Int_Cl_channel
; .
InterPro
IPR012336; Thioredoxin-like_fold
; .
Gene3D
G3DSA:1.20.1050.10; GST_C_like
; 1; .
Gene3D
G3DSA:3.40.30.10; Thioredoxin_fold
; 1; .
KO
K05021; -
; .
PRINTS
PR01263; INTCLCHANNEL
; .
SUPFAM
SSF47616; GST_C_like
; 1; .
SUPFAM
SSF52833; Thiordxn-like_fd
; 1; .
TIGRFAMs
TIGR00862; O-ClC
; 1; .
PROSITE
PS50405; GST_CTER
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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