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Searching in 'World-2DPAGE Repository [0008]' for entry matching: Q885K6




World-2DPAGE Repository (0008):  Q885K6


Q885K6


General information about the entry
View entry in simple text format
Entry nameQ885K6_PSESM
Primary accession numberQ885K6
integrated into World-2DPAGE Repository (0008) on February 5, 2009 (release 1)
2D Annotations were last modified onMay 27, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein;.
Gene nameOrderedLocusNames=PSPTO_1826
Annotated speciesPseudomonas putida group [TaxID: 136845]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900142;
Cheng Z., Woody O.Z., Song J., Glick B.R., McConkey B.J.
''Proteome reference map for the plant growth-promotiong bacterium Pseudomonas putida UW4''
Proteomics 9(17):4271-4274 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

PSEPU_UW4 {Pseudomonas putida UW4 proteome reference map}
Pseudomonas putida group
PSEPU_UW4
  map experimental info
 
PSEPU_UW4

MAP LOCATIONS:
pI=5.78; Mw=22900  [identification data]

IDENTIFICATION COMMENT: SPOT 224: SeqCov=5.04%. Mascot Protein score=60.19 [1].
MAPPING (identification):
SPOT 224: Tandem mass spectrometry [1].

Copyright
Data from Dr. Zhenyu Cheng, University of Waterloo, Canada
Cross-references
UniProtKB/TrEMBLQ885K6; Q885K6_PSESM.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ885K6_PSESM
Primary accession numberQ885K6
Sequence was last modified on June 1, 2003 (version 1)
Annotations were last modified on November 16, 2011 (version 51)
Name and origin of the protein
DescriptionSubName: Full=Arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein;
Gene nameOrderedLocusNames=PSPTO_1826
Encoded onOrderedLocusNames=PSPTO_1826
KeywordsComplete proteome.
Cross-references
EMBLAE016853; AAO55345.1; -; Genomic_DNA
RefSeqNP_791650.1; NC_004578.1; .
HSSPP02911; 1LST; .
ProteinModelPortalQ885K6; -; .
World-2DPAGE0008:Q885K6; -; .
GeneID1183467; -; .
GenomeReviewsAE016853_GR; PSPTO1826; .
KEGGpst:PSPTO_1826; -; .
NMPDRfig|223283.1.peg.1788; -; .
TIGRPSPTO1826; -; .
HOGENOMHBG698334; -; .
OMAPLKIGIE; -; .
ProtClustDBCLSK866193; -; .
BioCycPSYR223283:PSPTO_1826-MONOMER; -; .
GOGO:0030288; C:outer membrane-bounded periplasmic space; IEA:InterPro; .
GOGO:0005215; F:transporter activity; IEA:InterPro; .
InterProIPR005768; Lys_Arg_Orn-bd; .
InterProIPR001638; SBP_bac_3; .
KOK10022; -; .
PfamPF00497; SBP_bac_3; 1; .
SMARTSM00062; PBPb; 1; .
TIGRFAMsTIGR01096; 3A0103s03R; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server