World-2DPAGE Repository
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World-2DPAGE Repository
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SWISS-2DPAGE
World-2DPAGE Portal
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Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
Q91ZN1
World-2DPAGE Repository
(0004):
Q91ZN1
Q91ZN1
General information about the entry
View entry in simple text format
Entry name
COR1A_RAT
Primary accession number
Q91ZN1
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Coronin-1A; AltName: Full=Coronin-like protein A; Short=Clipin-A; AltName: Full=Tryptophan aspartate-containing coat protein; Short=TACO;.
Gene name
Name=Coro1a
Synonyms=Coro1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 304
:
pI=5.94; Mw=54000
[identification data]
MAPPING (identification):
SPOT
304
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
Q91ZN1; COR1A_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
COR1A_RAT
Primary accession number
Q91ZN1
Sequence was last modified on
January 23, 2007 (version 3)
Annotations were last modified on
November 16, 2011 (version 73)
Name and origin of the protein
Description
RecName: Full=Coronin-1A; AltName: Full=Coronin-like protein A; Short=Clipin-A; AltName: Full=Tryptophan aspartate-containing coat protein; Short=TACO;
Gene name
Name=Coro1a
Synonyms=Coro1
Encoded on
Name=Coro1a; Synonyms=Coro1
Keywords
Acetylation
;
Actin-binding
;
Coiled coil
;
Complete proteome
;
Cytoplasm
;
Cytoplasmic vesicle
;
Cytoskeleton
;
Direct protein sequencing
;
Membrane
;
Phosphoprotein
;
Reference proteome
;
Repeat
;
WD repeat
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AF416730; AAL18695.1
; -; mRNA
EMBL
AF495469; AAM18515.1
; -; mRNA
EMBL
BC086971; AAH86971.1
; -; mRNA
IPI
IPI00210071; -
; .
RefSeq
NP_569095.1; NM_130411.2
; .
UniGene
Rn.6990; -
; .
HSSP
O89053; 2AKF
; .
ProteinModelPortal
Q91ZN1; -
; .
SMR
Q91ZN1; 9-394
; 430-461; .
STRING
Q91ZN1; -
; .
World-2DPAGE
0004:Q91ZN1; -
; .
PRIDE
Q91ZN1; -
; .
Ensembl
ENSRNOT00000026496; ENSRNOP00000026496
; ENSRNOG00000019430; .
GeneID
155151; -
; .
KEGG
rno:155151; -
; .
UCSC
NM_130411; rat
; .
CTD
11151; -
; .
RGD
620009; Coro1a
; .
eggNOG
maNOG12806; -
; .
GeneTree
ENSGT00550000074317; -
; .
HOVERGEN
HBG059978; -
; .
InParanoid
Q91ZN1; -
; .
OMA
VPTVCGH; -
; .
OrthoDB
EOG4RNB8C; -
; .
PhylomeDB
Q91ZN1; -
; .
NextBio
620883; -
; .
ArrayExpress
Q91ZN1; -
; .
Genevestigator
Q91ZN1; -
; .
GO
GO:0030864; C:cortical actin cytoskeleton
; IBA:RefGenome; .
GO
GO:0030027; C:lamellipodium
; IBA:RefGenome; .
GO
GO:0001891; C:phagocytic cup
; IBA:RefGenome; .
GO
GO:0030670; C:phagocytic vesicle membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0051015; F:actin filament binding
; IBA:RefGenome; .
GO
GO:0030595; P:leukocyte chemotaxis
; IBA:RefGenome; .
GO
GO:0051126; P:negative regulation of actin nucleation
; IBA:RefGenome; .
GO
GO:0001845; P:phagolysosome assembly
; IBA:RefGenome; .
GO
GO:0050918; P:positive chemotaxis
; IBA:RefGenome; .
GO
GO:0008360; P:regulation of cell shape
; IBA:RefGenome; .
GO
GO:0030217; P:T cell differentiation
; NAS:RGD; .
GO
GO:0032796; P:uropod organization
; IBA:RefGenome; .
InterPro
IPR015505; Coronin
; .
InterPro
IPR015048; DUF1899
; .
InterPro
IPR015049; DUF1900
; .
InterPro
IPR015943; WD40/YVTN_repeat-like_dom
; .
InterPro
IPR001680; WD40_repeat
; .
InterPro
IPR019782; WD40_repeat_2
; .
InterPro
IPR019775; WD40_repeat_CS
; .
InterPro
IPR017986; WD40_repeat_dom
; .
InterPro
IPR019781; WD40_repeat_subgr
; .
Gene3D
G3DSA:2.130.10.10; WD40/YVTN_repeat-like
; 1; .
KO
K13882; -
; .
PANTHER
PTHR10856; Coronin
; 1; .
Pfam
PF08953; DUF1899
; 1; .
Pfam
PF08954; DUF1900
; 1; .
Pfam
PF00400; WD40
; 3; .
SMART
SM00320; WD40
; 3; .
PROSITE
PS00678; WD_REPEATS_1
; 2; .
PROSITE
PS50082; WD_REPEATS_2
; 2; .
PROSITE
PS50294; WD_REPEATS_REGION
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server