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Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q99MI5




World-2DPAGE Repository (0030):  Q99MI5

Q99MI5


General information about the entry
View entry in simple text format
Entry nameQ99MI5_RAT
Primary accession numberQ99MI5
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Spermidine synthase; SubName: Full=Uncharacterized protein;.
Gene nameName=Srm
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=5.36; Mw=38844  [identification data]

IDENTIFICATION: SPOT 1732: Mascot protein score=439. Number of peptides=8 [1].
MAPPING (identification):
SPOT 1732: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBLQ99MI5; Q99MI5_RAT.
World-2DPAGE RepositoryQ99MI5; Q99MI5_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ99MI5_RAT
Primary accession numberQ99MI5
Sequence was last modified on June 1, 2001 (version 1)
Annotations were last modified on November 16, 2011 (version 69)
Name and origin of the protein
DescriptionSubName: Full=Spermidine synthase; SubName: Full=Uncharacterized protein;
Gene nameName=Srm
Encoded onName=Srm
KeywordsComplete proteome; Reference proteome; Transferase.
Cross-references
EMBLBC128733; AAI28734.1; -; mRNA
EMBLAF337636; AAK21288.1; -; mRNA
IPIIPI00197952; -; .
RefSeqNP_445916.1; NM_053464.1; .
UniGeneRn.22258; -; .
HSSPQ9WZC2; 1INL; .
ProteinModelPortalQ99MI5; -; .
SMRQ99MI5; 6-302; .
STRINGQ99MI5; -; .
PRIDEQ99MI5; -; .
EnsemblENSRNOT00000014934; ENSRNOP00000014934; ENSRNOG00000011078; .
GeneID84596; -; .
KEGGrno:84596; -; .
NMPDRfig|10116.3.peg.24420; -; .
UCSCNM_053464; rat; .
CTD6723; -; .
RGD620796; Srm; .
eggNOGroNOG09764; -; .
GeneTreeENSGT00530000063329; -; .
HOVERGENHBG000834; -; .
InParanoidQ99MI5; -; .
OMAELWYTEK; -; .
OrthoDBEOG4H9XM0; -; .
PhylomeDBQ99MI5; -; .
NextBio617217; -; .
ArrayExpressQ99MI5; -; .
GenevestigatorQ99MI5; -; .
GOGO:0004766; F:spermidine synthase activity; IDA:RGD; .
GOGO:0008295; P:spermidine biosynthetic process; IDA:RGD; .
HAMAPMF_00198; Spermidine_synth; 1; -
InterProIPR001045; Sprmine_synthase; .
KOK00797; -; .
PANTHERPTHR11558; Sprmine_synthase; 1; .
PfamPF01564; Spermine_synth; 1; .
TIGRFAMsTIGR00417; SpeE; 1; .
PROSITEPS01330; SPERMIDINE_SYNTHASE_1; 1; .
PROSITEPS51006; SPERMIDINE_SYNTHASE_2; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server