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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q99MI5 World-2DPAGE Repository (0030):  Q99MI5 Q99MI5 General information about the entry View entry in simple text format Entry name Q99MI5_RAT Primary accession number Q99MI5 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description SubName: Full=Spermidine synthase; SubName: Full=Uncharacterized protein;. Gene name Name=Srm Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 1732: pI=5.36; Mw=38844   [identification data] IDENTIFICATION: SPOT 1732: Mascot protein score=439. Number of peptides=8 [1]. MAPPING (identification): SPOT 1732: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/TrEMBL Q99MI5; Q99MI5_RAT. World-2DPAGE Repository Q99MI5; Q99MI5_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/TrEMBL Extracted from UniProtKB/TrEMBL, release: 2011_11 Entry name Q99MI5_RAT Primary accession number Q99MI5 Sequence was last modified on  June 1, 2001 (version 1) Annotations were last modified on  November 16, 2011 (version 69) Name and origin of the protein Description SubName: Full=Spermidine synthase; SubName: Full=Uncharacterized protein; Gene name Name=Srm Encoded on Name=Srm Keywords Complete proteome; Reference proteome; Transferase. Cross-references EMBL BC128733; AAI28734.1; -; mRNA EMBL AF337636; AAK21288.1; -; mRNA IPI IPI00197952; -; . RefSeq NP_445916.1; NM_053464.1; . UniGene Rn.22258; -; . HSSP Q9WZC2; 1INL; . ProteinModelPortal Q99MI5; -; . SMR Q99MI5; 6-302; . STRING Q99MI5; -; . PRIDE Q99MI5; -; . Ensembl ENSRNOT00000014934; ENSRNOP00000014934; ENSRNOG00000011078; . GeneID 84596; -; . KEGG rno:84596; -; . NMPDR fig|10116.3.peg.24420; -; . UCSC NM_053464; rat; . CTD 6723; -; . RGD 620796; Srm; . eggNOG roNOG09764; -; . GeneTree ENSGT00530000063329; -; . HOVERGEN HBG000834; -; . InParanoid Q99MI5; -; . OMA ELWYTEK; -; . OrthoDB EOG4H9XM0; -; . PhylomeDB Q99MI5; -; . NextBio 617217; -; . ArrayExpress Q99MI5; -; . Genevestigator Q99MI5; -; . GO GO:0004766; F:spermidine synthase activity; IDA:RGD; . GO GO:0008295; P:spermidine biosynthetic process; IDA:RGD; . HAMAP MF_00198; Spermidine_synth; 1; - InterPro IPR001045; Sprmine_synthase; . KO K00797; -; . PANTHER PTHR11558; Sprmine_synthase; 1; . Pfam PF01564; Spermine_synth; 1; . TIGRFAMs TIGR00417; SpeE; 1; . PROSITE PS01330; SPERMIDINE_SYNTHASE_1; 1; . PROSITE PS51006; SPERMIDINE_SYNTHASE_2; 1; . World-2DPAGE Repository (search AC)