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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0030]' for entry
matching:
Q99MI5
World-2DPAGE Repository
(0030):
Q99MI5
Q99MI5
General information about the entry
View entry in simple text format
Entry name
Q99MI5_RAT
Primary accession number
Q99MI5
integrated into World-2DPAGE Repository (0030) on
November 9, 2010 (release 1)
2D Annotations were last modified on
June 21, 2011 (version 2)
General Annotations were last modified on
November 23, 2011 (version 2)
Name and origin of the protein
Description
SubName: Full=Spermidine synthase; SubName: Full=Uncharacterized protein;.
Gene name
Name=Srm
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000006
;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_INS1E_4-7
{INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
map experimental info
RAT_INS1E_4-7
MAP LOCATIONS:
SPOT 1732
:
pI=5.36; Mw=38844
[identification data]
IDENTIFICATION:
SPOT 1732: Mascot protein score=439. Number of peptides=8 [
1
].
MAPPING (identification):
SPOT
1732
:
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBL
Q99MI5; Q99MI5_RAT.
World-2DPAGE Repository
Q99MI5; Q99MI5_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/TrEMBL
Extracted from
UniProtKB/TrEMBL
, release:
2011_11
Entry name
Q99MI5_RAT
Primary accession number
Q99MI5
Sequence was last modified on
June 1, 2001 (version 1)
Annotations were last modified on
November 16, 2011 (version 69)
Name and origin of the protein
Description
SubName: Full=Spermidine synthase; SubName: Full=Uncharacterized protein;
Gene name
Name=Srm
Encoded on
Name=Srm
Keywords
Complete proteome
;
Reference proteome
;
Transferase
.
Cross-references
EMBL
BC128733; AAI28734.1
; -; mRNA
EMBL
AF337636; AAK21288.1
; -; mRNA
IPI
IPI00197952; -
; .
RefSeq
NP_445916.1; NM_053464.1
; .
UniGene
Rn.22258; -
; .
HSSP
Q9WZC2; 1INL
; .
ProteinModelPortal
Q99MI5; -
; .
SMR
Q99MI5; 6-302
; .
STRING
Q99MI5; -
; .
PRIDE
Q99MI5; -
; .
Ensembl
ENSRNOT00000014934; ENSRNOP00000014934
; ENSRNOG00000011078; .
GeneID
84596; -
; .
KEGG
rno:84596; -
; .
NMPDR
fig|10116.3.peg.24420; -
; .
UCSC
NM_053464; rat
; .
CTD
6723; -
; .
RGD
620796; Srm
; .
eggNOG
roNOG09764; -
; .
GeneTree
ENSGT00530000063329; -
; .
HOVERGEN
HBG000834; -
; .
InParanoid
Q99MI5; -
; .
OMA
ELWYTEK; -
; .
OrthoDB
EOG4H9XM0; -
; .
PhylomeDB
Q99MI5; -
; .
NextBio
617217; -
; .
ArrayExpress
Q99MI5; -
; .
Genevestigator
Q99MI5; -
; .
GO
GO:0004766; F:spermidine synthase activity
; IDA:RGD; .
GO
GO:0008295; P:spermidine biosynthetic process
; IDA:RGD; .
HAMAP
MF_00198; Spermidine_synth
; 1; -
InterPro
IPR001045; Sprmine_synthase
; .
KO
K00797; -
; .
PANTHER
PTHR11558; Sprmine_synthase
; 1; .
Pfam
PF01564; Spermine_synth
; 1; .
TIGRFAMs
TIGR00417; SpeE
; 1; .
PROSITE
PS01330; SPERMIDINE_SYNTHASE_1
; 1; .
PROSITE
PS51006; SPERMIDINE_SYNTHASE_2
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
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